Gene VIBHAR_05623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05623 
Symbol 
ID5558414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp827899 
End bp828885 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content42% 
IMG OID640910099 
Producthypothetical protein 
Protein accessionYP_001447753 
Protein GI156976847 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTT TAATATTAAG GCAGTATACT CAAAACATTG CGTTCCCCCT CGTATTCATT 
GCATTCGTTA TCATTGCTGG CGTGTCTTTC ACTCATTACC TGCTCACTCC GGAAGAACAG
GTTCAACCTG TCACCAACAG GCTTCAAGCA ACTGTTTTTA AAGAGATAAA CCACAACAAC
ATTGAACACA CCTACGAAAT CTACTTTCAG CGGGAAAAGA TCACTACCGG CGTTGTAGAT
TACTCTTTCG TGACATCTTT AATTAACGCT GGACTGTCTC AGCATGAGAT AAAGTCTTTG
ATAAAATTAA TTGAGAATGA ATTCGATATT ATCGGCTCGG TCCGAAAAGG TGACAAATTC
TCTATAAAAA CCAAAACCAA TAGTCATAAT GAAAAATACA TTAGTTCTTT TTACTATTCT
GGTAGTAAAA GAGACTTCTT TGTTATTAAT GATGGCAATA ACAACGCGTA CGATGAATAT
GGTAATAAGT TAATCCGCCA GCCTTATTAT GCATTTCCAC TAGCAAAAAA GTATAAAGTG
AGTTCTGGTT TTAATTTAAA GCGAAAGCAC CCAGTTACCG GTCTACTCGC TCCACATCTA
GGTACCGACT ACGCAGTGCC GATCGGAACA CCAATACAAA GTATCGCAGA TGGTATTGTT
GTTAAGTCAC GTTACAACCG CTTCGCTGGT AACTACATTA ACATCCGCCA TAGCAACGGT
TCCCTATCTC GTTATTTGCA TCTATCTCGT AGCGATGTTC GCTCAGGTGA CCACGTAACT
AAAGGGCAGA CCATCGGCCG CACAGGTAAT ACAGGAAGAA CTACTGGCCC TCACTTACAT
GTCGAACTCA TTGTAGATGG CGTCCCTGTT GATTATGCAC GTTACATCCG AACTAACCCT
GCGCCGCCTG CAAACACGCA GATGATGCTA GCGGCAAGAA CAGAGCGTGC AGAGCTTATT
AAAGAACTGC ATAAATACGC CTCTTAG
 
Protein sequence
MTSLILRQYT QNIAFPLVFI AFVIIAGVSF THYLLTPEEQ VQPVTNRLQA TVFKEINHNN 
IEHTYEIYFQ REKITTGVVD YSFVTSLINA GLSQHEIKSL IKLIENEFDI IGSVRKGDKF
SIKTKTNSHN EKYISSFYYS GSKRDFFVIN DGNNNAYDEY GNKLIRQPYY AFPLAKKYKV
SSGFNLKRKH PVTGLLAPHL GTDYAVPIGT PIQSIADGIV VKSRYNRFAG NYINIRHSNG
SLSRYLHLSR SDVRSGDHVT KGQTIGRTGN TGRTTGPHLH VELIVDGVPV DYARYIRTNP
APPANTQMML AARTERAELI KELHKYAS