Gene VIBHAR_05585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05585 
Symbol 
ID5558801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp789794 
End bp790711 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID640910061 
Producthypothetical protein 
Protein accessionYP_001447715 
Protein GI156976809 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTAA AGCATACCAC TACCAAACAA AAGGCTTCTC ATCCTATCCC GCAAGAAGCC 
TTCGATTGGT ACGACGAATA CGCCCACGGA AAAATCTCGC GCCGTGAGTT TCTTAATAGG 
CTAGGTGGTC TTGCTGTGCT TGGCTTCAGC ATGACAGCAC TGGTCGATGC GTTAACTCCG 
AATTACGCAC TGGCAGAACA AGTTTCATTT AACGATCCTG ACATCAAAGC AACCTACGAA 
ACCTTCCCGT CTCCAAACGG GCATGGAGAA GGACGCGGCT ATTTGGTGAT GCCACAGAAG 
AAGACCTTAA AATCACCGAC GGTGTTAGTG GTTCACGAAA ATCGTGGGTT GAACCCTTAT 
ATCAAAGACG TGGCTAGGCG ACTCGCGAAA GACGGCTTTA TTGCTTTTGC TCCAGACGCA 
CTTTATCCAC TCGGCGGCTA TCCGGGGAAC GACGATGAAG GTCGCGCCAT GCAGAAAGAG 
ATGGACAGAT CTAAGATCGA GCAAGACTTC ATTGCGGCGG CTAATTTCAT CAAACAGCAC 
GAGGATGGGA ACGGTAAGTT GGGGGCGGTC GGGTTCTGCT TCGGTGGTTA TATTGTCAAT 
ATGCTTGCAG CAGTGATGCC CGATGAGCTC GATGCAGGTG TGCCTTTCTA TGGAACACCT 
GCGGATCAAG AGATCCAAAA GCAAGTCAAA GGGCCGTTGA TGATTCACTT TGCAGGACTC 
GATAAGCGTG TTAACGACAC ATGGCCTACT TATGAACAGC AATTGATTGC AACCGACGCA 
CAGTATCAAG CGTTAATGTA TGAAAACGTC AATCACGGTT TCCATAACGA CTCAACAGCC 
CGATATGCGC CAGAAGAAGC GGCGCTCGCT TGGGAACGCA CACTCGGCTT CTTCAAAGAA 
CATCTCGCCT CTAGTTAA
 
Protein sequence
MVLKHTTTKQ KASHPIPQEA FDWYDEYAHG KISRREFLNR LGGLAVLGFS MTALVDALTP 
NYALAEQVSF NDPDIKATYE TFPSPNGHGE GRGYLVMPQK KTLKSPTVLV VHENRGLNPY 
IKDVARRLAK DGFIAFAPDA LYPLGGYPGN DDEGRAMQKE MDRSKIEQDF IAAANFIKQH 
EDGNGKLGAV GFCFGGYIVN MLAAVMPDEL DAGVPFYGTP ADQEIQKQVK GPLMIHFAGL 
DKRVNDTWPT YEQQLIATDA QYQALMYENV NHGFHNDSTA RYAPEEAALA WERTLGFFKE 
HLASS