Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05580 |
Symbol | |
ID | 5558116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 782687 |
End bp | 783943 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910056 |
Product | hypothetical protein |
Protein accession | YP_001447710 |
Protein GI | 156976804 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGAAT CTCGAGATAC GTTAAATTTT AGTGAATTAA ACACCACAAA TACTTGGACA AAGCACGATA CACACTGGCT ATTAAGCTTG TTTGGTACTG CTGTTGGTGC GGGTATTCTA TTTTTGCCGA TTAACCTTGG TATTGGCGGC TTTTGGCCTC TAGTTGTGAT GGCCGTTCTT GCATACCCAA TGACTTACTT AGCTCACCGT GGTCTTGCCC GATTTGTCCT GTCCTCAAAG ATCAAGAACG CTGATTTTAC CGATGTGGTA GAAGAACACT TTGGCGCGAA AGCGGGTCGT TCAATTTCGC TGCTATACTT CCTCTCTATC TTCCCAATCC TCCTAATCTA TGGCGTTGGC ATTACCAATA CTGTCGACAG CTTTATGGTC AATCAAGCGG GTATGGAGCC TTTACCGCGT GCCCTACTGT CTGGCGTATT AGTGTTTAGC TTAATTGCTA TCATGATGGC GGGTGAAAAA GTAATGCTGC GTGCCTTTGC CATCATGGTT TATCCGTTGG TGGCGATTCT GGCGTTTCTA TCATTCTACT TAATGCCAAA CTGGAGCATG CCAGTAATGG ACGCGCCAGA AATGTCGTCT TTTGCAAGCA CCATGTGGTT GGCGATTCCT GTCGTCATTT TTTCTTTCAG CCACGCGGCA GCAATCTCAA GCTTTGCCAA TGTTCAACGT CGTCACTACG GTGAGGCAGC GGATGCGAAG TCTGAGCTTA TTTTACGTCG CACTAGCATC ATGCTGATCG CTTTTGTGCT GTTGTTTGTC TTCTCTTGCG TGCTTGCGCT ATCTCCGCAG CAGCTGGCAG AAGCAAAAGA GCAAAACGTA TCTGTGTTGT CTTACTTAGC AAACGCTACG GACAATCCTT TTATTGCAAC GTTAGGTCCA CTTGTCGCAT TTGTCGCGAT CACCTCTTCT TTCCTTGGTC ACTTCCTTGG TGCACGTGAA AGCTTGAATG GTTTGATCAC TAAGCATTCT GATATGCCAA AGCAACGCGT AGATCGCATC AGTGTTGTTG TACTGTTTGT GTCTATTTGG ATTGCTGCGA TCATGAACCC TAGCATCTTG GGGATGATGG AAGCCCTGTC GGGACCTGTC ATCGCAATGA TCTTGTTCAT TATGCCAATG CTAGCGGTAT ACAAAGTAAA AGGACTGCAG AAGTATCGTG GAAAAGCATC GACCTACTTT GTACTTATGA CGGGAGTTAT CGCAGTAAGT GCGTTGGTTT TTAGCTTGTT GAGTTAA
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Protein sequence | MKESRDTLNF SELNTTNTWT KHDTHWLLSL FGTAVGAGIL FLPINLGIGG FWPLVVMAVL AYPMTYLAHR GLARFVLSSK IKNADFTDVV EEHFGAKAGR SISLLYFLSI FPILLIYGVG ITNTVDSFMV NQAGMEPLPR ALLSGVLVFS LIAIMMAGEK VMLRAFAIMV YPLVAILAFL SFYLMPNWSM PVMDAPEMSS FASTMWLAIP VVIFSFSHAA AISSFANVQR RHYGEAADAK SELILRRTSI MLIAFVLLFV FSCVLALSPQ QLAEAKEQNV SVLSYLANAT DNPFIATLGP LVAFVAITSS FLGHFLGARE SLNGLITKHS DMPKQRVDRI SVVVLFVSIW IAAIMNPSIL GMMEALSGPV IAMILFIMPM LAVYKVKGLQ KYRGKASTYF VLMTGVIAVS ALVFSLLS
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