Gene VIBHAR_05571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05571 
Symbol 
ID5558388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp772016 
End bp773257 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content45% 
IMG OID640910048 
Productsensory transduction protein kinase 
Protein accessionYP_001447702 
Protein GI156976796 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGG TTACCGACTC AAAGCATAAA GAATACCCAA GTATATATCG CAAGATCCGC 
TGGGGTTTTG GCTTGATGAC CTTTGCTATG TTTACGTTGT TTTGGTCGTT GATCTACGTT
GCTGAGAACA AACTTGAAGT ATTGAGCTTG CACCATTGGT TAGATACAGA AGTTGAGCTC
TATAAAGAAA ACTACCAAAA ACAAGGGTGG GACGCACCAT TGCCCAATGT GCTGGAGTTT
GATTCTTATT GGAGTGAAGC GCCAACGCCG GATTGGTTAT TGTCGTTTAA GTTTCCTGGA
TTCTACGAGT ATCTTTTAGG GGAAGAGGAT AAGCACTTCG TGGTGTTTGA GCATCCTTCT
GGTAAAGGTT TGATGTACAT CGTTTTCCAA GATGACTCAG ACGACTATTT GGATGAATAC
GAAAGCTCGT TGCACCAGTT TACCTTTTTC TTAGGGGGCT TGTTCTCCAT TATCATGGGC
GGCTATGGCG TATACATGGT ACGGATTTTG TCTCGACCTT TAGCTAAGAT CGAAGACAAA
ATTGGTCGCA TGCCCCCGGA TCAACCGACG TTTAATGTTG ATACCAAGTT CAGTGAGACT
CGCCATATTG AGCAGACGTT GCTCGACAGC AAAAATGAGA TTGCAGGTTA CTTCCGCCGT
GAACAAGAGT TTAGCCGCTT TGCCTCTCAT GAGTTACGCA CGCCAATCAT GGTAATCAAA
GGCTCTGCCG ATATTTTAGC TCGTGTTTCG GAGCAGCCTC CGGTGGCTCA AAAGGCGGTG
AGACGCATGC AAACGGCTTG TGACGAGATG CGAGTGTTAA CTGAAGCGTT CCTCTTGTTG
GGCAAAGAGA AAGTTGAAGA TCAACATTAC GCAGATCACG CTTTACTAGG GTGCTTGAAT
CAACAATTAG CGGAACTGGC ACCACTATTT GCTAAACAAG GTGCAGAGTA CAAACTGGAT
GAGCTTAATA CCGGTATGGT GCATGCGCCT GAAAGCTTTG TGACGATCGT GATCAACAAC
CTGATCAAGA ACGCATTCAG TTACAGTATC GGAGATATCG AAATTGTCCT TAATGGAACT
CAATTGACCA TTGTGAACCG TCACGATGGT AATGAGACCT ACAACGCCGG CTATGGATGT
GGCTTAGTGA TCGTGGAACG TATTTGTGAG CGCATGAGCT GGCCGTTTGA ACTCAATGAT
GATGGTATGA GGTTTACTGC CAAGGTCGAT TTTTATTCCT AA
 
Protein sequence
MDKVTDSKHK EYPSIYRKIR WGFGLMTFAM FTLFWSLIYV AENKLEVLSL HHWLDTEVEL 
YKENYQKQGW DAPLPNVLEF DSYWSEAPTP DWLLSFKFPG FYEYLLGEED KHFVVFEHPS
GKGLMYIVFQ DDSDDYLDEY ESSLHQFTFF LGGLFSIIMG GYGVYMVRIL SRPLAKIEDK
IGRMPPDQPT FNVDTKFSET RHIEQTLLDS KNEIAGYFRR EQEFSRFASH ELRTPIMVIK
GSADILARVS EQPPVAQKAV RRMQTACDEM RVLTEAFLLL GKEKVEDQHY ADHALLGCLN
QQLAELAPLF AKQGAEYKLD ELNTGMVHAP ESFVTIVINN LIKNAFSYSI GDIEIVLNGT
QLTIVNRHDG NETYNAGYGC GLVIVERICE RMSWPFELND DGMRFTAKVD FYS