Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05556 |
Symbol | |
ID | 5558531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 761113 |
End bp | 761433 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640910034 |
Product | 4,5-dioxygenase |
Protein accession | YP_001447688 |
Protein GI | 156976781 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3805] Aromatic ring-cleaving dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCACG TTCATGTTTA CTTTCCGCTT CAACAACAAG ATAAAGCTCA AGCGCTCAAT GAGATCATCC GTCAGGAGCG CCAAGACGTC TTGCGAGTAT CTCCGTTAGT GTGCAAATTA GTCGGCCCGC ATAAGATGCC AATGTTTGAA CTGCATATTG AATCGGTCAG TGATGAGTTT CTTGCTTGGC TTGATACCAT TAGAGGTGGC TTTTCAGTCC TAATTCATCC AGTCAGCGAC AATGAGTTAC GTGATCATAC CGAGCGTGCG ATTTGGTTGG GGCGTGAACT TGGTGTGTTT GAAGAAAAGC TCGAAGTATA A
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Protein sequence | MYHVHVYFPL QQQDKAQALN EIIRQERQDV LRVSPLVCKL VGPHKMPMFE LHIESVSDEF LAWLDTIRGG FSVLIHPVSD NELRDHTERA IWLGRELGVF EEKLEV
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