Gene VIBHAR_05556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05556 
Symbol 
ID5558531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp761113 
End bp761433 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content45% 
IMG OID640910034 
Product4,5-dioxygenase 
Protein accessionYP_001447688 
Protein GI156976781 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCACG TTCATGTTTA CTTTCCGCTT CAACAACAAG ATAAAGCTCA AGCGCTCAAT 
GAGATCATCC GTCAGGAGCG CCAAGACGTC TTGCGAGTAT CTCCGTTAGT GTGCAAATTA
GTCGGCCCGC ATAAGATGCC AATGTTTGAA CTGCATATTG AATCGGTCAG TGATGAGTTT
CTTGCTTGGC TTGATACCAT TAGAGGTGGC TTTTCAGTCC TAATTCATCC AGTCAGCGAC
AATGAGTTAC GTGATCATAC CGAGCGTGCG ATTTGGTTGG GGCGTGAACT TGGTGTGTTT
GAAGAAAAGC TCGAAGTATA A
 
Protein sequence
MYHVHVYFPL QQQDKAQALN EIIRQERQDV LRVSPLVCKL VGPHKMPMFE LHIESVSDEF 
LAWLDTIRGG FSVLIHPVSD NELRDHTERA IWLGRELGVF EEKLEV