Gene VIBHAR_05554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05554 
Symbol 
ID5558255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp758448 
End bp759431 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID640910031 
Productpyruvate dehydrogenase E1 component, beta subunit 
Protein accessionYP_001447685 
Protein GI156976779 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC TGACGTTAGT TGAAGCAGTG AACCTCGCAC TGCACCATGA AATGGAACGC 
GACCCGAATG TCATCGTCCT TGGCGAAGAT GTGGGTGACA ACGGCGGTGT ATTCCGCGCC
ACTGTCGGAC TCAAGCAAAA ATACGGCCTT AAGCGCGTTA TCGACACGCC ATTAGCCGAA
GCACTTATTG GCGGTGTCAC TGTCGGGATG GCAACGCAAG GCTTAAGACC TGTCGCAGAG
TTTCAATTCC AAGGCTTTGT CTTCCCCGCG CTGGAGCATT TAATGTGTCA CGCAGCGCGA
ATGCGTAACC GTACTCGTGG TCGACTTACC TGCCCCGCAG TGTTCCGTGC ACCTTTTGGT
GGCGGTATTC ACGCACCAGA ACATCACTCT GAAAGTGTTG AAGCTCTGTT TGCTCACACC
GCAGGTTTTA AGGTTGTGAT TCCTTCCTCA CCGCAACGTG CTTACGGTTT GCTCCTTGCA
GCCATACGTA GCAACGATCC GGTAATGTTC TTCGAGCCGA AACGTACCTA TCGCACTGTG
AAATCAGAAG TGATTGATAA CGGCGAGGCA CTTCCTCTGG ATACTTGCTT TACCTTACGC
AAAGGTCGCG ACGTCACATT AGTGACTTGG GGCGCATGCG TGGTTGAATC ACTGCAAGCA
GCTCAAACGC TGTCTAATCA GGGTATCGAA GTTGAGGTGA TTGATTTAGC CAGCATCAAA
CCCATTGATA CCGCGACCAT CTTCCGTTCA CTTGAGAAAA CCGGACGCCT CTTGGTGGTA
CATGAAGCCA GTAAAACCTG TGGTGTCGGC TCAGAACTGC TAGCCAGAAC CGCAGAACAT
GCGATGTGCC TACTCAAAGC GCCACCAAAA CGCGTCACAG GTATGGATAC CATTATGCCG
TACTACCGCA ACGAAGATTA TTACATGGTT CAGGAAGAAG ACATTGTACT CGCCGCGCGC
GAACTCGTGG AGGATTGGAA ATGA
 
Protein sequence
MAELTLVEAV NLALHHEMER DPNVIVLGED VGDNGGVFRA TVGLKQKYGL KRVIDTPLAE 
ALIGGVTVGM ATQGLRPVAE FQFQGFVFPA LEHLMCHAAR MRNRTRGRLT CPAVFRAPFG
GGIHAPEHHS ESVEALFAHT AGFKVVIPSS PQRAYGLLLA AIRSNDPVMF FEPKRTYRTV
KSEVIDNGEA LPLDTCFTLR KGRDVTLVTW GACVVESLQA AQTLSNQGIE VEVIDLASIK
PIDTATIFRS LEKTGRLLVV HEASKTCGVG SELLARTAEH AMCLLKAPPK RVTGMDTIMP
YYRNEDYYMV QEEDIVLAAR ELVEDWK