Gene VIBHAR_05553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05553 
Symbol 
ID5558254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp757309 
End bp758451 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID640910030 
Productbranched-chain alpha-keto acid dehydrogenase subunit E2 
Protein accessionYP_001447684 
Protein GI156976778 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGT TTAACTTACC CGATCTCGGC GAAGGTCTCG CTGAGTCAGA AATTGTGAAA 
TGGCATATTA GTGTTGGCGA TATGGTCCAA CTCGATCAAA TAGTACTTAC CGTGGAAACC
GCAAAAGCGA CAGTGGATGT CCCTGCTCCT TATGGTGGTC GCATCGTCAG TCGTCACGGT
GAAGAAGGTG ATGTGATTAA CATCGGTGCT CTACTTCTGG AAATCGATGA AACTGGGGCA
GAACAAGCAG CTACAGAACA AAAGCAAACG GCTGATGCTG CAACCGTGGT GGGTAATGTC
TCCCAGCACG CACATAGCGT GAATGTCGAT GACTTCTGGA TTGGCGGTGA ACATAACCCC
TCTCCCGATA ATCTCATCAG CGCTCTCCCT TCGGCGCGTT TGTTAGCGAA TAAACTAGGA
GTCGATTTAG CGTCGGTGAA AGGTAGCGGC CCCGACGGTT TAATCCTTGA TTCAGATATC
TATGACGAAG CTGGCAAACA GCGCCCAGGA ACAGAGGTGC TGAAAGGTGC ACGTCGAACC
ATGGTGTCGA CAATGGCGGA ATCTCACCAT AATGTCGCAG CAGTAACCAT TACTGAGGAA
GCGGTCTTAG ATGGTTGGAA GCAAGGCGAA GACATCAGTA TTCGTCTCGT CCAAGCCATT
GTGCATGCTT GTCAGGAAGA ACCCGCCATG AATGCATGGT TTGATGCGGA AACCATGACG
CGTTGTGTCC ACAGTACAGT CAACATCGGT ATTGCGGTCG ACAGCCGACA CGGTTTGTAC
GTGCCTGTTC TTCGACACGC TGATGAGTAT GAGCCGCAAG AGGTGCGCCG TTGGTTAGAT
CAAACCGTAC AAGGTATACG CGAACGTAAG ATTGGTCGCG ATCAGTTACA GCACGCCACC
ATTACGCTTT CAAATTTTGG CGCAATTGCA GGTATCTACG CAACGCCTGT TGTAACTCCT
CCGCAAGTTG CGATTGTCGG TGCGGGTCGA ATCATTGAGA AGGTCGTAAT TCGAGACGGG
CAAGCTGTAG CAGTGAAAGC CATGCCGCTG TCGATTACGT TTGACCACCG AGCATGTACT
GGTGGTGAAG CAGCAAGGTT CACAAAAGTA CTGGCAGAGC ACTTGAGAAA ACCGAGTGTT
TAG
 
Protein sequence
MKTFNLPDLG EGLAESEIVK WHISVGDMVQ LDQIVLTVET AKATVDVPAP YGGRIVSRHG 
EEGDVINIGA LLLEIDETGA EQAATEQKQT ADAATVVGNV SQHAHSVNVD DFWIGGEHNP
SPDNLISALP SARLLANKLG VDLASVKGSG PDGLILDSDI YDEAGKQRPG TEVLKGARRT
MVSTMAESHH NVAAVTITEE AVLDGWKQGE DISIRLVQAI VHACQEEPAM NAWFDAETMT
RCVHSTVNIG IAVDSRHGLY VPVLRHADEY EPQEVRRWLD QTVQGIRERK IGRDQLQHAT
ITLSNFGAIA GIYATPVVTP PQVAIVGAGR IIEKVVIRDG QAVAVKAMPL SITFDHRACT
GGEAARFTKV LAEHLRKPSV