Gene VIBHAR_05549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05549 
Symbol 
ID5558503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp754393 
End bp755358 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID640910026 
Productacyl-CoA dehydrogenase, short-chain specific 
Protein accessionYP_001447680 
Protein GI156976774 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA AACCGTTAGC AACCTTGGTC ATTGTGGAAC ACGATAACCA ATCACTTTCA 
GTGGATACAT TACGCGCATT GAGTGCGGCT TCTGATATTC AACAAGACGG TACACCTTTG 
CCTGTAACGG CGTTGCTCAT CGGCCATCAT TGCGGTTCAG TATTGGGCGA GTTGAAGTGT 
GTACAAGGTA TTTCGCAGAT CATCGTGATT GATGCTGCCG AATATCAGCA TCCGTTGGCA 
GAAAACCTGT CGACATTAAT TGCCGACGTT GGTAAGGATT TTTCTCATAT CCTAGCTCCA 
GCGAGTACGT TTGGTAAAAA CCTAATGCCT CGTGTCGCTG CATTGCTGGA TGTTGGGCAG 
CTGTCGGATG TGATTGCGAT TGAATCGCCT GATACGGTTG TTCGTCCAAT CTATGCCGGT 
AATGCGTTAG CCAGAGTTCG CTCGGACGAT GCTACCAAAG TGATGACGAT TCGAAGCTCT 
GCGTTTGACG CAATTGCTGT GTCTGATTCT CCAGTAGTTG AGAATGTCGC CACGTTAGAA 
ACGGTAATTA AGGCAGAACA CTGTGAGTTT GTTTCACAGC AGAAAGCGGA AAGTGAAAGA 
CCAGAGCTAC CGGCGGCGAA CGTCGTTGTG TCCGGCGGTC GTGGGTTGGG CAGCAAAGAG 
AGCTTTGCGC TGGTGGAACA ACTTGCTGAC AAGCTTGGTG GCGCTATTGG TGCGTCTCGC 
GCTGCGGTAG ATGCGGGTTT TGTGTCTAAC GATTTGCAAG TTGGGCAGAC AGGTAAGATT 
GTCGCGCCTC AGCTGTACAT TGCTGTGGGT ATTTCCGGTG CAATTCAACA TTTAGCAGGG 
ATGAAAGATT CCAAGGTGAT TGTGGCGATC AACAGTGATC CAGAAGCCCC AATCTTCCAA 
GTTGCAGACT ATGGTTTAGT TGGCGACCTG TTTGAGATTA TGCCGGAGTT GCTGGAGAAG 
GTGTAA
 
Protein sequence
MENKPLATLV IVEHDNQSLS VDTLRALSAA SDIQQDGTPL PVTALLIGHH CGSVLGELKC 
VQGISQIIVI DAAEYQHPLA ENLSTLIADV GKDFSHILAP ASTFGKNLMP RVAALLDVGQ 
LSDVIAIESP DTVVRPIYAG NALARVRSDD ATKVMTIRSS AFDAIAVSDS PVVENVATLE 
TVIKAEHCEF VSQQKAESER PELPAANVVV SGGRGLGSKE SFALVEQLAD KLGGAIGASR 
AAVDAGFVSN DLQVGQTGKI VAPQLYIAVG ISGAIQHLAG MKDSKVIVAI NSDPEAPIFQ 
VADYGLVGDL FEIMPELLEK V