Gene VIBHAR_05482 details

Gene Information

• Locus tag: VIBHAR_05482
• ID: 5558376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 694184
• End bp: 695395
• Gene Length: 1212 bp
• Protein Length: 403 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640909959
• Product: acyl-CoA thiolase
• Protein accession: YP_001447613
• Protein GI: 156976707
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAACG ACATCTGGAT TGTCAGTGCA AAGCGAACGC CAATTGGGCG TTTTCAAGGT 
CAATTACAAG GATATTCAGC GCCTCAATTA GGGGCATTTG CCATCAAATC GGCAGCGGGT 
GCGAGCGGGA TTAGCCAAGT CGATGAAGTC TATATGGGCT GCGTATTACC AGCAGGGTGC 
GGGCAAGCTC CAGCCAGACA AGCGGCGCTA GGTGCAGATC TTCCGCTAAC CACAGGCTGT 
ACCACCATCA ACAAAGTATG TGGATCGGGA ATGAAGAGCG TCATGCTGGC TCACGATCTC 
ATCAAAGCGG GTAGTATTCG AAGTGCTATT GCTGGTGGGA TGGAAAGCAT GACCAACGCA 
CCGTATCTGC TCAAAGAAGC ACGCAACGGC ATGCGAATGG GTCATCAATC TACCTACGAC 
CACATGTTCC TCGATGGTCT TCAAGATGCG TATGAAGGGC ATTTGATGGG AGTCTATGCG 
CAGCAAACGG CTGACCGTTC TGAGTTTACC CGTGAGCAAA TGGATGAATG GGCGATCCTA 
TCCGCGACAA GAGCATTGGA AGCGCAAGAG CAGCGTCTGT TTGACGATGA AATCTCGCCG 
ATAGAAATCA CGACACGTCA TAACACTTCA ATTTTGGATT ACGACGAGCA TCCTCGCTCG 
ATTAAGCTCG ACAAAATTCC TCAACTCAAA CCTGCTTTTG ATAAGAACGG CTCGGTGACC 
GCAGCAAACT CTAGTGCGAT TTCTGACGGG GCTGCAGCGT TAGTATTGAT GGATTCTCAA 
GTCGCACAGC ATCAAGGCTT AACGCCATTA GCAATCATCA AAGGGCACTC AACCCACGCC 
AGAAAGCCTG CTGAATTTAC CCTCGCCCCT GTTTTTGCAA TAGAGCAGTT GTTATCTCAA 
CTCGACTGGT CAGTAGACGA GGTCGATCTT TGGGAGATTA ACGAAGCGTT CGCCGTTGTC 
ACACAAATCG CGGTACGCCA ACTGGGCATC GATAAAGGCA AAGTAAACAT CAAAGGCGGT 
GCGTGTGCGC TTGGGCATCC AATTGGTGCA AGTGGTGCTC GTATCTTGGT GACTCTCATT 
CATAGTCTAC GCCAACTGCA AACGCTTGGT GTAGATGGTG ACAACAACAA TAAAAAGGTG 
ATGCGAGGTG TTGCATCACT GTGTATCGGT GGTGGTGAAG CCACTGCTAT TGGTATCGAG 
ATACCGCTTT AA 

 

Protein sequence

MGNDIWIVSA KRTPIGRFQG QLQGYSAPQL GAFAIKSAAG ASGISQVDEV YMGCVLPAGC 
GQAPARQAAL GADLPLTTGC TTINKVCGSG MKSVMLAHDL IKAGSIRSAI AGGMESMTNA 
PYLLKEARNG MRMGHQSTYD HMFLDGLQDA YEGHLMGVYA QQTADRSEFT REQMDEWAIL 
SATRALEAQE QRLFDDEISP IEITTRHNTS ILDYDEHPRS IKLDKIPQLK PAFDKNGSVT 
AANSSAISDG AAALVLMDSQ VAQHQGLTPL AIIKGHSTHA RKPAEFTLAP VFAIEQLLSQ 
LDWSVDEVDL WEINEAFAVV TQIAVRQLGI DKGKVNIKGG ACALGHPIGA SGARILVTLI 
HSLRQLQTLG VDGDNNNKKV MRGVASLCIG GGEATAIGIE IPL