Gene VIBHAR_05465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05465 
Symbol 
ID5558869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp679847 
End bp680458 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content50% 
IMG OID640909942 
ProductCbb3-type cytochrome oxidase 
Protein accessionYP_001447596 
Protein GI156976690 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAG ACTTTACGCA TTCAGTGATC ATCTTGATCA TCACCACCGC TGTTGTGGCT 
TCCTTCTCTC TTGTAGTGTG GGTAGTGCCT AACATCCTGC GTACTGACGA CATCGCCAAA 
GGCAGTTTAG CGAAGCCGTT AACCGCGTTG GAGCTTGCTG GTCGCGATAT CTACATCAGC 
GAAGGTTGCC ATGTGTGCCA CACGCAGATG GTTCGCCCGC TAGAGCCTGA AATCAAACGT 
AACGGACGCG CGAACCAAGA GTCCGATGAT ATTTACGAGT TCCCTAATTT ATGGGGTTCC 
AAACGAACTG GCCCAGACCT AACCAATCTT GGACGCAAGT ATTCGGACCA ATGGCATGTA 
TTACATCTTA TCGACCCACG CCAAGTCGTT CCTACATCCA TCATGCCGGC TTATCCTTGG 
TTGTTTGAGC AGACATTGTC TGGTAACGCC ATTGGTAACA AGATGGAAAC GCTCCGTACG 
TTAGGCGTGC CCTACACCGA CCAAGAGATA TCAGACGCGC GATTACAAAT ACGCGGTAAA 
ACCAAAGCGG AAGCTCTGAT TCGTTATCTT CAAAGCCTTG GTCAAGACAC AGCACAGGAG 
GTGGCACAAT GA
 
Protein sequence
MSKDFTHSVI ILIITTAVVA SFSLVVWVVP NILRTDDIAK GSLAKPLTAL ELAGRDIYIS 
EGCHVCHTQM VRPLEPEIKR NGRANQESDD IYEFPNLWGS KRTGPDLTNL GRKYSDQWHV 
LHLIDPRQVV PTSIMPAYPW LFEQTLSGNA IGNKMETLRT LGVPYTDQEI SDARLQIRGK 
TKAEALIRYL QSLGQDTAQE VAQ