Gene VIBHAR_05460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05460 
Symbol 
ID5556734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp674965 
End bp675645 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID640909937 
Productoxidoreductase 
Protein accessionYP_001447591 
Protein GI156976685 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CAAGTCTATT TAAAGACAAA GTTGGTGCGA TTTCTGCTCA CCAATCAGAG 
TTTATGAATT GGATGTCTCC AACGCTACGC GATTACTGGA GTGACTTCTT AGGTCGAGCA 
CAAAGCAGCT TCTTATTTTC TAAAGTACGC GATCACCAGC AACCTGCTGT TAACGAAGAA 
GTAATCCCTC AACCTGAGCC GATCGTGCTT AAGCCAGAAG CGCAAGTTCT ATTTGATGAG 
CTAAGCGACA AGGTGGGCGA AGTGATTCAC GTGGGTGACT GGGTTTATGT ATCTCAAGAG 
CGTATTAACC AATTCGGCTC TGTAACTGAA GATATGCAAT GGATTCACAC GGATCCTGAG 
CGTGCGGCTT CTGAGTCTCC ATTCAAAACG ACGATTGCAC ACGGCTTCCT AACGCTAGCG 
CTATTGCCTA AGCTGACAGA CTCTGTTGAC CCATCAAACC CAATGTTCCC AACGGCAAAG 
CTAGTGGTGA ACCTAGGTCT GAACCAAGTG CGTTTCCCAT ACCCAGTGAA AGCGGGTAAC 
AACGTTCGTG CATCAAGTAC GCTAACTAAA ATCACGCCAA TCAAGAAAGG TCTTGAGATA 
GAGCGTGAAA TCAAAGTAGA AATCGAAGGT GTGCGTCGAC CTGGAGCAGT GGTTGTTTCA 
GTGATTCAAT TGCACTTCTA A
 
Protein sequence
MKVTSLFKDK VGAISAHQSE FMNWMSPTLR DYWSDFLGRA QSSFLFSKVR DHQQPAVNEE 
VIPQPEPIVL KPEAQVLFDE LSDKVGEVIH VGDWVYVSQE RINQFGSVTE DMQWIHTDPE 
RAASESPFKT TIAHGFLTLA LLPKLTDSVD PSNPMFPTAK LVVNLGLNQV RFPYPVKAGN 
NVRASSTLTK ITPIKKGLEI EREIKVEIEG VRRPGAVVVS VIQLHF