Gene VIBHAR_05448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05448 
Symbol 
ID5556582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp664701 
End bp666170 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content42% 
IMG OID640909925 
Producthypothetical protein 
Protein accessionYP_001447580 
Protein GI156976674 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA AAGAGCTTTT GAAAAAAGCC ATTATTTTTC TTCTGCCTAT ACCGTTGGTT 
GCGGCAGAAG TACTTTATTC ATCTCACCAA AGTGTTCAGC GAAATCTTGT CCATATTCTT
GATAACGATA CTCCAGTTGT GGAGGAGATT TTTCACCAGA TTAAGGCAGA GAATCGCACT
GCCCTGTTAC GCCCTGAGCA TTGCGAGGCT CTACAGTATA ACTTAATGTT CGAGCGTCAC
ATCGACGAGA TGCTCATTCT CAAGGATGAT GAAATAATCT GCTCGTCAAA GCTCGGTGCG
ATATCCCGTC CTGCGGATGA CTATATCCAA ATGTATCGCC CAGAGACACT CTCACTTGGT
CGTGTAAATG GTTATCCAGA TCAGGTTTTG TTCTTAAGTA TTACCAGCGA AGAGCATCCT
GAATACAGAG CAGTGACCAT CATCGACCGA GACTACTTTG CTGCCACGGT TGGTTACCGA
AATGACTTTA GACTTAAACG TACTGCTATT TTTGTTGGTG ATGAGTCTGC ACCAATGGAT
TTAACGAAAG ATGGTGAGAA CGAAACTGCG CTTTATTACT CTTCGAGTTT CGATTATGAG
ATCTTAATTG AAGCAAGTGA CGATTTTATC GAGCAAAAGC GTTTCTCATC CTTCTATTCT
TCCATTCCGG CTTTACTGAC CTTTTACTTA TTCATTTTTC TCGTCCGTCG CTTTATCGAT
CCACAGCGCA ACATGGTCTC TGAGCTTAAA AAAGCAATCA GAAAGCGTGA ATTGAAGCTC
TACTATCAAC TTCAAGTGGA TGCTCAAACA GGCAAAGTCT TTGGTTATGA GGCATTAGTT
CGATGGCCGC ATAAACTGAG AGGTTTTATC TCACCGGATG AATTTGTACC TGTGGCAGAA
GAGAGTGGGT TGGTAGAAAG CCTAACCGAC TTTGTGTTGG ATAAAGCTTG TGAAGACTTC
TCAAAAGTTA AATTAGAAGA GTCGATACAT TTGGGCGTCA ACGTACCGCC TGGTTATTTG
TCTGATTCCC ATGTGATAAG AAAAATTGAG AACATTCATC GTACTTTAAA ACAACACAAC
GTCGAATTAG GGATTGAAAT TACCGAAAGG CAGTTGATAG ACAGTAACGC CATTCAACAT
ATCGCTGCTC TGCGAGTCCA TGGTATTCAA GTGCTTATCG ATGATTTTGG TACAGGGCAA
ACCGCCTTAG CCGTGTTACA GCACATGAAG GTCGATTACT TGAAAATCGA TAAGTGTTTT
GTCGACACTA TTGGGATTGA GAGTGTTAAT TCGTCAGTAT TACACGCCAT AGTCAGGCTG
GCTGGAGATT TAAGTGTTGA GTTGGTTGCA GAAGGCGTAG AGACAAAAGA GCAAGCTGAC
CACTTAAAAG CGTTAGGGGT GAACATTCAC CAAGGTTACT TCTATGCTAA GCCACTCCCT
TATGCCGAAG TGCTTGGCAA TAGAGAGTAG
 
Protein sequence
MIKKELLKKA IIFLLPIPLV AAEVLYSSHQ SVQRNLVHIL DNDTPVVEEI FHQIKAENRT 
ALLRPEHCEA LQYNLMFERH IDEMLILKDD EIICSSKLGA ISRPADDYIQ MYRPETLSLG
RVNGYPDQVL FLSITSEEHP EYRAVTIIDR DYFAATVGYR NDFRLKRTAI FVGDESAPMD
LTKDGENETA LYYSSSFDYE ILIEASDDFI EQKRFSSFYS SIPALLTFYL FIFLVRRFID
PQRNMVSELK KAIRKRELKL YYQLQVDAQT GKVFGYEALV RWPHKLRGFI SPDEFVPVAE
ESGLVESLTD FVLDKACEDF SKVKLEESIH LGVNVPPGYL SDSHVIRKIE NIHRTLKQHN
VELGIEITER QLIDSNAIQH IAALRVHGIQ VLIDDFGTGQ TALAVLQHMK VDYLKIDKCF
VDTIGIESVN SSVLHAIVRL AGDLSVELVA EGVETKEQAD HLKALGVNIH QGYFYAKPLP
YAEVLGNRE