Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05448 |
Symbol | |
ID | 5556582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 664701 |
End bp | 666170 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640909925 |
Product | hypothetical protein |
Protein accession | YP_001447580 |
Protein GI | 156976674 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGA AAGAGCTTTT GAAAAAAGCC ATTATTTTTC TTCTGCCTAT ACCGTTGGTT GCGGCAGAAG TACTTTATTC ATCTCACCAA AGTGTTCAGC GAAATCTTGT CCATATTCTT GATAACGATA CTCCAGTTGT GGAGGAGATT TTTCACCAGA TTAAGGCAGA GAATCGCACT GCCCTGTTAC GCCCTGAGCA TTGCGAGGCT CTACAGTATA ACTTAATGTT CGAGCGTCAC ATCGACGAGA TGCTCATTCT CAAGGATGAT GAAATAATCT GCTCGTCAAA GCTCGGTGCG ATATCCCGTC CTGCGGATGA CTATATCCAA ATGTATCGCC CAGAGACACT CTCACTTGGT CGTGTAAATG GTTATCCAGA TCAGGTTTTG TTCTTAAGTA TTACCAGCGA AGAGCATCCT GAATACAGAG CAGTGACCAT CATCGACCGA GACTACTTTG CTGCCACGGT TGGTTACCGA AATGACTTTA GACTTAAACG TACTGCTATT TTTGTTGGTG ATGAGTCTGC ACCAATGGAT TTAACGAAAG ATGGTGAGAA CGAAACTGCG CTTTATTACT CTTCGAGTTT CGATTATGAG ATCTTAATTG AAGCAAGTGA CGATTTTATC GAGCAAAAGC GTTTCTCATC CTTCTATTCT TCCATTCCGG CTTTACTGAC CTTTTACTTA TTCATTTTTC TCGTCCGTCG CTTTATCGAT CCACAGCGCA ACATGGTCTC TGAGCTTAAA AAAGCAATCA GAAAGCGTGA ATTGAAGCTC TACTATCAAC TTCAAGTGGA TGCTCAAACA GGCAAAGTCT TTGGTTATGA GGCATTAGTT CGATGGCCGC ATAAACTGAG AGGTTTTATC TCACCGGATG AATTTGTACC TGTGGCAGAA GAGAGTGGGT TGGTAGAAAG CCTAACCGAC TTTGTGTTGG ATAAAGCTTG TGAAGACTTC TCAAAAGTTA AATTAGAAGA GTCGATACAT TTGGGCGTCA ACGTACCGCC TGGTTATTTG TCTGATTCCC ATGTGATAAG AAAAATTGAG AACATTCATC GTACTTTAAA ACAACACAAC GTCGAATTAG GGATTGAAAT TACCGAAAGG CAGTTGATAG ACAGTAACGC CATTCAACAT ATCGCTGCTC TGCGAGTCCA TGGTATTCAA GTGCTTATCG ATGATTTTGG TACAGGGCAA ACCGCCTTAG CCGTGTTACA GCACATGAAG GTCGATTACT TGAAAATCGA TAAGTGTTTT GTCGACACTA TTGGGATTGA GAGTGTTAAT TCGTCAGTAT TACACGCCAT AGTCAGGCTG GCTGGAGATT TAAGTGTTGA GTTGGTTGCA GAAGGCGTAG AGACAAAAGA GCAAGCTGAC CACTTAAAAG CGTTAGGGGT GAACATTCAC CAAGGTTACT TCTATGCTAA GCCACTCCCT TATGCCGAAG TGCTTGGCAA TAGAGAGTAG
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Protein sequence | MIKKELLKKA IIFLLPIPLV AAEVLYSSHQ SVQRNLVHIL DNDTPVVEEI FHQIKAENRT ALLRPEHCEA LQYNLMFERH IDEMLILKDD EIICSSKLGA ISRPADDYIQ MYRPETLSLG RVNGYPDQVL FLSITSEEHP EYRAVTIIDR DYFAATVGYR NDFRLKRTAI FVGDESAPMD LTKDGENETA LYYSSSFDYE ILIEASDDFI EQKRFSSFYS SIPALLTFYL FIFLVRRFID PQRNMVSELK KAIRKRELKL YYQLQVDAQT GKVFGYEALV RWPHKLRGFI SPDEFVPVAE ESGLVESLTD FVLDKACEDF SKVKLEESIH LGVNVPPGYL SDSHVIRKIE NIHRTLKQHN VELGIEITER QLIDSNAIQH IAALRVHGIQ VLIDDFGTGQ TALAVLQHMK VDYLKIDKCF VDTIGIESVN SSVLHAIVRL AGDLSVELVA EGVETKEQAD HLKALGVNIH QGYFYAKPLP YAEVLGNRE
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