Gene VIBHAR_05447 details

Gene Information

• Locus tag: VIBHAR_05447
• ID: 5556568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: -
• Start bp: 663483
• End bp: 664217
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640909924
• Product: hypothetical protein
• Protein accession: YP_001447579
• Protein GI: 156976673
• COG category: [K] Transcription
• COG ID: [COG1414] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACAA ACAAAGCCAA CGCTAACCAA GTCAACGAAA AGGCGCTGCA ATTGCTGATG 
CAAGTCGCAG TTAGTCAATT TCCAGTCTCA GCGAAAACGC TCAGTGAACA ACTGAATGTG 
CCTTTAAGTA GTCTTTACCG ACACTTGAAG CTACTCAAAG AGTGGAACTT GATCGAAGAA 
AGCGTACACG ACAAAACTTT TGTAGTTGGT CCTGCCGCCC TGCTGTTAAT GCACAGCTAT 
GAAACCGCTC AACACGGTTT GGATATGGTG GAAACCATTC TTGCTCGATT GGTTCAACAA 
ACGGGTGAGA TGGCGGCTTA CATGGTGCCT TCTGGCTATC GTGCGCTTTG TGTCAGACAA 
AAAGAAAGTA TGCAGGCGCT TCGATGCAGC TACGTCCAGG GTCAAAGTCA ACCATTGCTT 
CGTGGCGCCT CATCTAAGGT GATGCTGGCT TTCATGCCTC AAAGCCGTTG CGAAAAAATC 
TTGCGTCATT TTGGGCAAGA TCATCGCCTC AGCGAATGGG AACAGGAGCT TAGCACCATC 
CGTAAGAACG GATACGCTGT TAGTACATCA GAAATCGATC CTGGTGTATC TGGCATCAGT 
GCCCCAGTCA TGAAAGGAAG TAAATTGATT GGCGCGGTCT CGGTGATGGC TCCGGCTCAC 
CGAGTCGAGA AGGATAAGCA GCGTATCATT TTGCATGTGT TGCAGGCAGC GAGGGCGTTG 
CCGCCAGAAA GGTAA 

 

Protein sequence

MTTNKANANQ VNEKALQLLM QVAVSQFPVS AKTLSEQLNV PLSSLYRHLK LLKEWNLIEE 
SVHDKTFVVG PAALLLMHSY ETAQHGLDMV ETILARLVQQ TGEMAAYMVP SGYRALCVRQ 
KESMQALRCS YVQGQSQPLL RGASSKVMLA FMPQSRCEKI LRHFGQDHRL SEWEQELSTI 
RKNGYAVSTS EIDPGVSGIS APVMKGSKLI GAVSVMAPAH RVEKDKQRII LHVLQAARAL 
PPER