| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05443 |
|---|
| Symbol | |
|---|
| ID | 5556668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 658005 |
|---|
| End bp | 659297 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909920 |
|---|
| Product | ATP-dependent RNA helicase |
|---|
| Protein accession | YP_001447575 |
|---|
| Protein GI | 156976669 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTT CATCTCAAGG TTTTGCGCCA GAAGTGGTTA AAGCTCTGGC AGAATGCGGT
TATGAGAAGT TAACGCCAAT TCAACAGAAG GCGATTCCGA TGGCCCGTAA AGGTCATGAT
ATTTTTGCAA CGGCACAAAC GGGTACAGGT AAAACTGCCG CGTTCTCTCT GCCTATGATT
CAACAGTTAT TGGAATCCGG CCGCAGCGCA TCTCGCAAAA CGGCACGTGC ACTGATCATG
GCGCCTACTC GTGAGCTAGC AGAGCAAATC GCAGACAATA TCAAAGCATA CACTAAGTAT
ACAGACCTAT CGGTTGCGGC GATCTTTGGT GGCCGCAAGA TGTCTTCTCA AGTGACAGCG
CTAGAAGGTG GTGTGGATAT TCTTGTTGCG ACGCCTGGCC GTCTAGAAGA GCACATCGAG
CAAGGTAACG TATCAGTCGC GAGCATCGAG TTCCTTGTGT TTGATGAAGC GGACCGTATT
CTTGATATGG GCTTTATCCA TGCTGTACGT AAAATAATGA TGGATGTGGA TACAGACCCA
CAAATCATGA TGTTCTCAGC AACCACATCG AGCCAGTTGA ACCTATTGGC AAAAGATATC
CTTCGTAAGC CAAAGCGCAT CGAAGTAGAA CGAGCAAACA CAACCGCACA AACTATTGCG
CACGTACTTT ACCCAGTGGA TCAAGAGCGC AAGACAGAGC TTCTTTCTGA GCTAATCGGC
CGCAAGAACT GGAAGCAAGT CTTGGTGTTC GTAAACTACA AAGAAACTGC GAACGATGTT
GTGAAAGAGC TTAAGCTAGA TGGTATTAAA GCCGTTGTGT GTCACGGTGA CCGTGCACAA
AGCGCTCGTC GTCGTGCGTT AGAAGAATTC AAAACAGGCA AAGCTCGTGT AATGGTTGCA
ACAGATGTCG CCGCTCGTGG TCTGGATATT GAAGATCTAC CACACGTAGT GAACTACGAT
ATGCCATTCC TTGCAGAAGA CTACGTTCAC CGTATAGGTC GTACAGGTCG TGCTGGTAAA
CAAGGTCACG CCGTATCGTT TGTTAACCGC GAAGAAGAGC TAACAGTGGT GCAGGTTGAA
AACCTAATCC AGCAACGCAT TCGTCGTATT GAGCTAGCAG GTTACGAGCC AAAACAGCGT
GAATCTTACA TTGAGAAACT AAACTCAAAG CCTGCATTCA AGAACCGCCA AGGCCGTCGT
AATAACCCGA ACCAATCGGC AACAGACCAA GGCTCTGCAG AGCGTCGCTT AGCGATGGTA
AAACGCTTGA AAGCGCGTCG CTCTTCTAAA TAA
|
|---|
| Protein sequence | MSFSSQGFAP EVVKALAECG YEKLTPIQQK AIPMARKGHD IFATAQTGTG KTAAFSLPMI
QQLLESGRSA SRKTARALIM APTRELAEQI ADNIKAYTKY TDLSVAAIFG GRKMSSQVTA
LEGGVDILVA TPGRLEEHIE QGNVSVASIE FLVFDEADRI LDMGFIHAVR KIMMDVDTDP
QIMMFSATTS SQLNLLAKDI LRKPKRIEVE RANTTAQTIA HVLYPVDQER KTELLSELIG
RKNWKQVLVF VNYKETANDV VKELKLDGIK AVVCHGDRAQ SARRRALEEF KTGKARVMVA
TDVAARGLDI EDLPHVVNYD MPFLAEDYVH RIGRTGRAGK QGHAVSFVNR EEELTVVQVE
NLIQQRIRRI ELAGYEPKQR ESYIEKLNSK PAFKNRQGRR NNPNQSATDQ GSAERRLAMV
KRLKARRSSK
|
|---|
| |