| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05442 |
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| Symbol | |
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| ID | 5556667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 656220 |
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| End bp | 657839 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640909919 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447574 |
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| Protein GI | 156976668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCCTG TCTTATCTTT CTCAAAACTT AAGTTCTTCT GTCTGCGTTT TGTCGTTATC
TTCTTCCTGC TCGTTGCGGT GTTTGGTGTC ATCATTCACT ACGATACGTC TGCGTCTGAA
GAAGCGGAAA AGAGCAACAT TCGTGTGCAA CAAAAAGCGT TATTACAGGG CAAGAAGCAA
TACATCGAGT GGGTGATAAG GTCGGTTGTC CGCGAAACTG CATTGTTGGC TGACATTATG
TCCGCAAAGC GAGTTTATGA GATTACCGAT CTTCCTTTGG ATGAGCAGCG TAGTGCACAG
CTTTCTCGTT TACGGTCAAT TTTAGAAGCA GTGAGCCAGC GAAAAGAAGT CTATGATCAA
TTGCGGTATA TAGATATGAA GGGTAATGAA GTAGTTCGTA TCAATTTTGA TCAGCACCAT
TCTCATATTG TTCCAGAAAT AGAACTTCAA AACAAAAGCC ATCGTTACTA CTTTTCAGAA
GCCCTAAAAC TTGGTTGCAA CAAAATGTAT GTTTCACCCA TGGATTTGAA TGTAGAACAA
GGGGAGATTG AAGAGCCAGC TAAGCCGATG ATCCGTTTAG CGACGCCTGT TTTAGACCAA
GATGGAAAGA AGCGGGGTAT TGTGGTTGTG AACTACTTGG CTAACTATCT TATGGAAGGC
ATGCAATTGT TCAACCTTGA TCAGGGAGCG AACTATATGC TTCTAAATAA AAATGGCTTC
TATCTGTTCA ATAAAGAGCA CCGGGAGGCT GAGTTTGCGT TCATGTACGA CGATCGACAA
GACGAAACCA TTTACGCTGA TTACCCAGAG TTAGCCGATC AAATTCGAAA TACGCTCTCC
GGACAGATTG AAACTGATGA GGGCGTTTTA ACGATTGAGT CGGTCGGCAC CGATGGCTAT
CACAACCCAT ATTGCTTTCA TGATTATTAT GTTAGTGAAA GCAGCTCAAC ATCTTGGAAG
TTAGTCTCTT ATGTTGATTT CAATAAGAGA GAAAATATAT CTAAATCTAA GTACGAACAT
GAATGGCTTA TGCAAGTGGG TGTGGTGTTG AGTATCGTTT TGGCTTATCT CATTGCACGC
TTTCAGCTTC GTGCGTTTTC GGACAACCAA CGTATTTACT ACCTAGCGCA TCATGACAGT
CTGACTGGTT TGGTTAACCG AGCTGCTTTT CAAAGCCAAG CATCGGAGAC TTTGTCCCAA
TGTTTGAAAG CGGGTAGAGA GGTGTGCTTG ATATATCTTG ACCTTGATAA CTTTAAGTTT
ATCAATGATG AATACGGCCA TGCGGCGGGC GATAAGACCC TTCAACACGT CGCTTCCGTG
ATGCAGCGAG TGTTTGGCAG TAAAGCGCTT CTTGCTCGAT TAGGGGGCGA TGAGTTCGCT
ATTCTGTTGA GCAGTCAAGA ACATATGCAA GATCCAGAAC ATTTCGCGTC GTCTTTGATT
CAATTGATTC AAGACCCGAT CGAGGTTCGC CCTGATGTGT TCCATCAAGT CACGACCTCA
ATTGGTGGTT GCTATGCGAA AGAAACAACC TGCACCTTGG ATGAGTTAAT GCATCAAGCG
GATATGGCGA TGTATGAAGC GAAGAGGTCG GGAAAAAACC GGTATTTCTT TATCCAATAA
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| Protein sequence | MNPVLSFSKL KFFCLRFVVI FFLLVAVFGV IIHYDTSASE EAEKSNIRVQ QKALLQGKKQ
YIEWVIRSVV RETALLADIM SAKRVYEITD LPLDEQRSAQ LSRLRSILEA VSQRKEVYDQ
LRYIDMKGNE VVRINFDQHH SHIVPEIELQ NKSHRYYFSE ALKLGCNKMY VSPMDLNVEQ
GEIEEPAKPM IRLATPVLDQ DGKKRGIVVV NYLANYLMEG MQLFNLDQGA NYMLLNKNGF
YLFNKEHREA EFAFMYDDRQ DETIYADYPE LADQIRNTLS GQIETDEGVL TIESVGTDGY
HNPYCFHDYY VSESSSTSWK LVSYVDFNKR ENISKSKYEH EWLMQVGVVL SIVLAYLIAR
FQLRAFSDNQ RIYYLAHHDS LTGLVNRAAF QSQASETLSQ CLKAGREVCL IYLDLDNFKF
INDEYGHAAG DKTLQHVASV MQRVFGSKAL LARLGGDEFA ILLSSQEHMQ DPEHFASSLI
QLIQDPIEVR PDVFHQVTTS IGGCYAKETT CTLDELMHQA DMAMYEAKRS GKNRYFFIQ
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