| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05409 |
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| Symbol | |
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| ID | 5556983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 631770 |
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| End bp | 632384 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640909886 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001447541 |
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| Protein GI | 156976635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT TCCCTTTACA GCTCGATAAA ATTAAAGCCG TGGTGTTTGA CTTAGACAAC
ACCTTGGTGA GTTCTGATAT GAACTTCGGT GAACTGCGTC GACAGCTCGG TTGTCCGCAG
AGTGAAGATC TATTAGATTT TGTCGAAGCA CTCGAGCACC CTCATCATCG AGAGCACGCT
CATAACGTGA TATTTGATTA CGAGATTTCT GATGCTGAGC AGTCCGCCCC CATGCTCGGC
TGTCATGAAT TGCTCGCTCA CTTGCATCAA AATGAAATCA AAACCGCTAT CGTGACGCGC
AACTGTCAAA TCGCCACGCA GCGCAAACTA GAACACAACC AAATCTCAGT GGAACGAGTC
ATCACTCGCG AGTGTTTCCC GCCCAAGCCA GACCCACTAT CTTTGCAGGT ATTGGCGAAG
GAGTGGCGCT TAATGCCAGA TGAAGTGCTT TATGTTGGCG ATTTTCTTTA TGACTTACAG
GCTGCGTACA ACGCGCGGAT GCCCTCTTGC CTTGTTCATC ACGGTAATCA AGAAACCTTC
AATGACTCAG CCTCGTTGGC GCTTAGCGAA CTCAGTGATT TGTTGAGCCA TTTCCAATCC
TTACCGCGAA CATAA
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| Protein sequence | MNPFPLQLDK IKAVVFDLDN TLVSSDMNFG ELRRQLGCPQ SEDLLDFVEA LEHPHHREHA
HNVIFDYEIS DAEQSAPMLG CHELLAHLHQ NEIKTAIVTR NCQIATQRKL EHNQISVERV
ITRECFPPKP DPLSLQVLAK EWRLMPDEVL YVGDFLYDLQ AAYNARMPSC LVHHGNQETF
NDSASLALSE LSDLLSHFQS LPRT
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