Gene VIBHAR_05406 details

Gene Information

• Locus tag: VIBHAR_05406
• ID: 5557044
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 628931
• End bp: 630931
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640909883
• Product: histidine kinase/response regulator hybrid protein
• Protein accession: YP_001447538
• Protein GI: 156976632
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTTA CGATATCAGG GAAGTTGCAG CTCAGTTTTG TGCTGCTAGC CGTACTTTTT 
ATGGCATCAG CGGTATTCAC GTATCGCAAC GTCACCACCG TAGAGCAATA CGCCTCTTCG 
CTACTTAAAT CCGATTTACC GACCGTAGAC ACCAGTCGCG GTATCCAACA GTCCGTTCAA 
GCGTCGCTGT CTTCTATTCG AGCCTACATG TTGCTAGGTG GCGATGAAGA GGCTAGCGCA 
CGTCTAAGTG AGGACGTACG CAATATCATG GCATCTACAG ACGAGTCGCT TCCAACGTTG 
CAGGCTTTGA TCTCTGAACA GGATTTTCAA GCGATCCAAA GCCAGTGGGA TGCGGTAAAA 
GTTTCTCTGA ACAAGCTGAT TGAGCTCAGC CACAGTGATG AGAACTTACC CGCGCACAAC 
CTCTTTATTA ACGAAGCAGC CCCCATCGCA GAAGTGGCAC TTGATCAGCT TCAAAGCTTA 
ATCAACGAAG AGTCTGGAAA CCCATTTGGT GGAGACAGAA AGCGTCTGTT TAAAGTCTAC 
GCCGACAGCT ATACCTCGCT CGCCAATGCA TTGTCTGCTC TGCGAGATTT CCTTTTGTAC 
GGGCAGCAAG ACCATCTAGA CAAATACCAT GATTTGATTA AGTACCACAA TCAGTCTGTC 
GCGGAAATCG ACAGCAAACT CGACAGACTT ACCGACAACG ACCAATCATT GTGGTCACTG 
TTTAAAGAAA TGCAGCAACT GTACTTTCCT TTAGCAGAGC AGGTAATTGC ATTACGTCAG 
TCACCAGAAT GGAACGAATC AAACTTGTTG ATGGCGAACG AACTGTTGCC TGCAGCAGAT 
GCACTAGACC AAAGCTTAGA GACGATCGTA TTGGCGCAGC AAAGTCGTGC TGATCAAAGC 
GGACAGGGTA TCAATCAGTC GATCAAGAAC GTACTCACCA CTATGTTGAT TGCGGCAGCG 
TTGGTTTTGT TTGCCGCGAT AGCAATTTCA AAATACATGG GTAATACCAT TGGGCGCCGA 
GTGAAGAACT TGTCGGAACG AGCAAAGACG ATCGCTTCAG GAGACGTTTC TCAGCCTCCG 
CTCACTGTTG TTGGGAAAGA TGAATTGGCA GACCTTACCG ATTCGATTAA CCGTATGAAC 
CAATCGTTAG CGAGCATTGT GGCAGGAGTA AGTGAGAAAG CGAACCAAGT GGATACCAGC 
ATGGGGGCTT TATTGGAATC GGCGCAAGTC ACCTCATCGA ATGTAGAGCA GCAACAGACC 
AGCATTGTTG AAATGGGAAG CCAATTGGAT GAAATCGCTT TAGCCGCACG TAACGCCCTA 
GATCAAGCCA ATCAATCGGT GCAAAAGCTT TCTGACTCAA AAGGCGAGAT TGAACAAGGG 
CGTGATGCTT TAGAGCAAAA CAAAGTCACC ATGGAAAGCT TGCATGGCAG CATTGAAACC 
GCGAGTACGC AAGTGACGCA GTTAAGCAAA GAGAGCGAAG CCATTGGCCG AGTTACGGAA 
GTGATTGAAG GCTTGGCAGA GCAAACTAAC TTACTGGCAT TGAATGCGGC GATAGAAGCA 
GCGCGTGCAG GTGATCAAGG TAGAGGCTTT GCAGTTGTGG CGGACGAAGT GCGTATGCTG 
GCGACTCGCA CTACTCAATC GACGACAGAA ATCAACGGCA TCATCAATGC GATTCAACGT 
TCGACTAATT CAGTGGTTGA GGAAATTGAA CACAGCCAAT TACTTGCAGA GCAGGGTGCA 
GAGCACATTG AAAAAGCGGT CACTCGTTTG CTCGCTACTA CTGAGCAAAT CGGTTCTTTG 
AATGAGCAAA TGGCAGAACT TGCGGCAACG GCAGAGCAGC AATCGCATGC GACCAATTCG 
ATCACGGGAT TGATGTCTGA TATTACTCAA TCAGTGGACG AAGTTTCGAA TAACAGCCAA 
CGTGCATCAG AGACGTCATT GCAAGTAAAA GAACAAGTTA CTGAGCTGAA TCAACAGATG 
GCAACTTTCA AGACCGCATA A 

 

Protein sequence

MNLTISGKLQ LSFVLLAVLF MASAVFTYRN VTTVEQYASS LLKSDLPTVD TSRGIQQSVQ 
ASLSSIRAYM LLGGDEEASA RLSEDVRNIM ASTDESLPTL QALISEQDFQ AIQSQWDAVK 
VSLNKLIELS HSDENLPAHN LFINEAAPIA EVALDQLQSL INEESGNPFG GDRKRLFKVY 
ADSYTSLANA LSALRDFLLY GQQDHLDKYH DLIKYHNQSV AEIDSKLDRL TDNDQSLWSL 
FKEMQQLYFP LAEQVIALRQ SPEWNESNLL MANELLPAAD ALDQSLETIV LAQQSRADQS 
GQGINQSIKN VLTTMLIAAA LVLFAAIAIS KYMGNTIGRR VKNLSERAKT IASGDVSQPP 
LTVVGKDELA DLTDSINRMN QSLASIVAGV SEKANQVDTS MGALLESAQV TSSNVEQQQT 
SIVEMGSQLD EIALAARNAL DQANQSVQKL SDSKGEIEQG RDALEQNKVT MESLHGSIET 
ASTQVTQLSK ESEAIGRVTE VIEGLAEQTN LLALNAAIEA ARAGDQGRGF AVVADEVRML 
ATRTTQSTTE INGIINAIQR STNSVVEEIE HSQLLAEQGA EHIEKAVTRL LATTEQIGSL 
NEQMAELAAT AEQQSHATNS ITGLMSDITQ SVDEVSNNSQ RASETSLQVK EQVTELNQQM 
ATFKTA