Gene VIBHAR_05403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05403 
Symbol 
ID5557041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp626803 
End bp627516 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content49% 
IMG OID640909880 
ProductABC transporter ATPase subunit 
Protein accessionYP_001447535 
Protein GI156976629 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA AACTAGAAAA CCTAACTAAG ATTTACAACG CCGATGGTGA TTTCCCTGTG 
CACGCAGTGC AGTCGGTAGA CTTGGAGATT AAGCAGGGTG AGTTCGTTGC GATCATGGGG
CCATCTGGTT CGGGTAAAAC GACGTTGCTG AACATGATTG GCGGTATTGA TGCCCCAAGC
TCTGGCAAAG TGGAAATCGA CGGTTGTATG ATTTCATCGA TGTCAGAAAA AGAACTGATT
GCCTATCGTC GCGATAATAT AGGCTTCATC TTCCAAGACT ACAGTTTGTT ACCTGTGTTA
ACCGCGCTTG AGAATGTGGA ATTCGTCATG CAGCTGCAAG GTAAAACAGA GCGAGAATGC
CGTGAACGTG CGACGTCCTT GCTTGAACAA GTGGGTTTAG CGGAACAAAT GAATAAGGTG
CCAGGTAAAA TGTCCGGCGG CCAGCAGCAG CGTGTTGCGG TTGCTCGTGC TTTAGCGCCA
AAGCCTCGTT TTGTCATGGC GGACGAACCC ACTGCCAATC TAGACGCCAA AAGCACCGCG
GAGCTGCTCG ACATTATGGA GCAACTGAGC GAACAAGAGG GAACGACGTT TATCTTCTCG
ACCCATGACC CGAGAGTGAT AAAACGTGCA CACCGAATTA TCGTGTTTGA AGACGGTCGT
TTGGCGCGTG ATTTCAGCAA TATTGATAAT CGCGCAGAGA GGTCGCATGC ATAG
 
Protein sequence
MTIKLENLTK IYNADGDFPV HAVQSVDLEI KQGEFVAIMG PSGSGKTTLL NMIGGIDAPS 
SGKVEIDGCM ISSMSEKELI AYRRDNIGFI FQDYSLLPVL TALENVEFVM QLQGKTEREC
RERATSLLEQ VGLAEQMNKV PGKMSGGQQQ RVAVARALAP KPRFVMADEP TANLDAKSTA
ELLDIMEQLS EQEGTTFIFS THDPRVIKRA HRIIVFEDGR LARDFSNIDN RAERSHA