Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05403 |
Symbol | |
ID | 5557041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 626803 |
End bp | 627516 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909880 |
Product | ABC transporter ATPase subunit |
Protein accession | YP_001447535 |
Protein GI | 156976629 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCA AACTAGAAAA CCTAACTAAG ATTTACAACG CCGATGGTGA TTTCCCTGTG CACGCAGTGC AGTCGGTAGA CTTGGAGATT AAGCAGGGTG AGTTCGTTGC GATCATGGGG CCATCTGGTT CGGGTAAAAC GACGTTGCTG AACATGATTG GCGGTATTGA TGCCCCAAGC TCTGGCAAAG TGGAAATCGA CGGTTGTATG ATTTCATCGA TGTCAGAAAA AGAACTGATT GCCTATCGTC GCGATAATAT AGGCTTCATC TTCCAAGACT ACAGTTTGTT ACCTGTGTTA ACCGCGCTTG AGAATGTGGA ATTCGTCATG CAGCTGCAAG GTAAAACAGA GCGAGAATGC CGTGAACGTG CGACGTCCTT GCTTGAACAA GTGGGTTTAG CGGAACAAAT GAATAAGGTG CCAGGTAAAA TGTCCGGCGG CCAGCAGCAG CGTGTTGCGG TTGCTCGTGC TTTAGCGCCA AAGCCTCGTT TTGTCATGGC GGACGAACCC ACTGCCAATC TAGACGCCAA AAGCACCGCG GAGCTGCTCG ACATTATGGA GCAACTGAGC GAACAAGAGG GAACGACGTT TATCTTCTCG ACCCATGACC CGAGAGTGAT AAAACGTGCA CACCGAATTA TCGTGTTTGA AGACGGTCGT TTGGCGCGTG ATTTCAGCAA TATTGATAAT CGCGCAGAGA GGTCGCATGC ATAG
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Protein sequence | MTIKLENLTK IYNADGDFPV HAVQSVDLEI KQGEFVAIMG PSGSGKTTLL NMIGGIDAPS SGKVEIDGCM ISSMSEKELI AYRRDNIGFI FQDYSLLPVL TALENVEFVM QLQGKTEREC RERATSLLEQ VGLAEQMNKV PGKMSGGQQQ RVAVARALAP KPRFVMADEP TANLDAKSTA ELLDIMEQLS EQEGTTFIFS THDPRVIKRA HRIIVFEDGR LARDFSNIDN RAERSHA
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