| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05399 |
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| Symbol | |
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| ID | 5558422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 621976 |
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| End bp | 623418 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640909876 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447531 |
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| Protein GI | 156976625 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTCA TACGTTATAG TACTTATGTT TGGAAAAACA CCACGTTTAG CATTGCTCTA
TTAATAGTGG GCGTGCTGCA TAGTGCTGTG ACGTATGGTC AAGAGACCCA GAAAGAGACT
CTCGTTATCG CTAATTCAAA AGCGTGGAAG CCTTTCTCTT ATCTCACACC AGATGGTGAG
CCTAAAGGCA TCTTAATTGA TTTTTGGCGT GAGTATGCCG TTAGAAATGA TGTTCATGTT
CAGTTTCTTC TGCTTGATTG GGAAGACTCT TTGCTCGCAG TGAAAGAAGG TAGAGCAGAC
ATTCATGCTG GGCTCATATT TTCAGAAGAG CGCAACCAGT ACCTGAACTT TGGCACAGTG
ATCATGCCTA TTGATACCCA ACTATACGTG AACAGCGACC TTTTGGGCAT CGATGTTGAT
TCGGTGTTGG CTGGGGAGTC TGCGATGGAG GTGGGGTTAG TTAAAGGGGG ATATGAAGAG
ACTTTCGTTC GTAAGCGTTA TCCCAATGCC GCAATAAAAC GGTTTGCGAA TAGTGATGCA
TTATTAAAAG CCGTTACCGA CAAAAAGATA TTCCTGTTTG TGGTCGATAC TCAAGTGTCT
AATTTCTATA TGGCGACGAC ATCAGATGCA GTGACGTTCT TGCCTGCATT ACACCTTTAT
AGCAAAAGCT TGAGAATCGC GACGGGAGAG GCGAGCTCAG AGTCGATCGA AGCCATCTCC
AAGAAATTTG AAACGGTGTT GGAAGCAGAC AAAGATCGAA TTTTAAGTCG TTGGATCCAC
GTTAAAACGG TTTATCCCGC CTATTTGGCG CCCCTTGCTG TGTTTGCTCT TATTATGGCG
GCTATGTTCC ATATCTTTTC ACTCAAACGC ACGGTGGCGC TGCGCGCGCG GCAACTCACT
ATGGCGAATC AACAGCTTTT TGAGCTCACC CTGACTGACC CTCTCACTAA GCTTTATAAT
CGACGTCACT TGATTGAGCG TTTAGCGACG TTAAGTAACG TAAGGCGAAA CTTGACCGTG
ATGGTGTTTG ATATTGATGA CTTCAAATCC ATCAATGACC AATTCGGGCA TGTGGTTGGC
GATCAAGCCA TTATCGCCGT TGCGAATACG GCGAGAACCG TGATCGATGA AAGAATGACG
TTGGCACGCA TTGGTGGTGA AGAGTTCGCT TTGGTGACAG CTTCGCTTTC TGCTGAAGAA
GCTGAAGTAC TCGCTCGTAC AATTTGCACC CAAGTGCATT GCTCACCGGT GACTTTGGAT
GGACAAACGA TTAGCGTGAG TATCAGTTTA GGGTGCGCGT ATTATCCAAA ATTTGATGAA
CAACCAAGCC TGCAAGATGC AGATCAACTT ATGTACCGTG GCAAGGCAAA TGGGAAAAAT
CGTGCAGTGT TCCAAATCAT TAACAGAAAC AAAGTTGAGC CATTACTTCT TAAAGCTCAG
TGA
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| Protein sequence | MTLIRYSTYV WKNTTFSIAL LIVGVLHSAV TYGQETQKET LVIANSKAWK PFSYLTPDGE
PKGILIDFWR EYAVRNDVHV QFLLLDWEDS LLAVKEGRAD IHAGLIFSEE RNQYLNFGTV
IMPIDTQLYV NSDLLGIDVD SVLAGESAME VGLVKGGYEE TFVRKRYPNA AIKRFANSDA
LLKAVTDKKI FLFVVDTQVS NFYMATTSDA VTFLPALHLY SKSLRIATGE ASSESIEAIS
KKFETVLEAD KDRILSRWIH VKTVYPAYLA PLAVFALIMA AMFHIFSLKR TVALRARQLT
MANQQLFELT LTDPLTKLYN RRHLIERLAT LSNVRRNLTV MVFDIDDFKS INDQFGHVVG
DQAIIAVANT ARTVIDERMT LARIGGEEFA LVTASLSAEE AEVLARTICT QVHCSPVTLD
GQTISVSISL GCAYYPKFDE QPSLQDADQL MYRGKANGKN RAVFQIINRN KVEPLLLKAQ
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