Gene VIBHAR_05365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05365 
Symbol 
ID5556897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp594884 
End bp595690 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID640909842 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001447497 
Protein GI156976591 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGAAGA ATTTCGCCAG TGTCTTAATT CGCTTTTTTA ATGCCGTTAA GAATGGAGTC 
TTTTTAATGA AGAAAGTCGC TTTGATCACC GGATCAAAAG GCGGAATTGG TTCTGCAATT
TCCTCTCAAC TAGTGAATGA TGGTTACCGC GTTATTGCAA CGTATTTTAC TGGTAAATAT
GAGTGTGCTT TGGAATGGTT TAATGAAAAA GGGTTTACCA AAGATCAGGT TCGCCTTTTT
GAATTAGACG TGACCGACAC CGCTCAGTGT GCTGAGAAAT TGGCACTTAT CCTCGAGGAA
GAAGGGACAA TAGACGTCGT TATCAACAAC GCAGGTATTA CACGTGATGG CGTGTTCAAA
AAGATGACTG CTCAAGCTTG GAACGACGTG ATCAATACCA ACTTAAATAG CTTGTTCAAT
GTGACGCAGC CACTTTTCGC AGCCATGTGT GAAAAAGGTG GTGGTCGCAT CATCAATATC
TCTTCTGTGA ATGGTCTGAA AGGGCAGTTT GGGCAAGCAA ACTACTCGGC AGCAAAAGCT
GGCATGATTG GATTCTCCAA AGCATTAGCC TACGAGGGCG CACGCTCAGG CGTCACAGTA
AATGTTATTG CCCCGGGATA CACAGGCACT CCAATGGTTG AGCAGATGAA ACCAGAAGTG
CTTGAGTCGA TCACGAGTCA AATTCCAATG AAGCGTCTGG CGACGCCAGA AGAAATTGCT
GCATCAGTGA GCTTTTTAGT AAGTGATGCA GGCGCGTACA TCACCGGCGA AACATTGTCG
GTGAATGGCG GCCTATACAT GCACTAA
 
Protein sequence
MAKNFASVLI RFFNAVKNGV FLMKKVALIT GSKGGIGSAI SSQLVNDGYR VIATYFTGKY 
ECALEWFNEK GFTKDQVRLF ELDVTDTAQC AEKLALILEE EGTIDVVINN AGITRDGVFK
KMTAQAWNDV INTNLNSLFN VTQPLFAAMC EKGGGRIINI SSVNGLKGQF GQANYSAAKA
GMIGFSKALA YEGARSGVTV NVIAPGYTGT PMVEQMKPEV LESITSQIPM KRLATPEEIA
ASVSFLVSDA GAYITGETLS VNGGLYMH