Gene VIBHAR_05364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05364 
Symbol 
ID5556896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp593572 
End bp594192 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID640909841 
Productputative threonine efflux protein 
Protein accessionYP_001447496 
Protein GI156976590 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCG CTTTGCTAAC CATGTTCATC CCTACCTTCT TTTTTGTTTC GATCACGCCT 
GGGATGTGTA TGACCCTTGC TCTCACGTTA GGAATGAGTA TTGGGTATCG CCGAACCCTA 
TGGATGATGG CTGGTGAACT GGTTGGCGTG GCACTGGTGT CTGTCTCTGC GGTATTGGGC 
ATCGCTGCAA TAATGCTGAA TTATCCTTGG TTATTCACCG CCCTTAAATT AATTGGTGGT 
GGCTACCTTC TCTATTTAGG CATCGAAATG TGGCGCTCAC GTGGCAAACT CGCCATCAAC 
GTTGAGAATG TTGGTGTCCC GACTAGTGGC AACTGGGATT TGGTTTTACA GGGCTTTGTC 
ACCGCAATCG CCAACCCTAA AGGTTGGGCG TTTATGATTC CCCTTCTGCC ACCTTTTATC 
AATCAAAATG CCGCTCTTGC GCCTCAGCTG ATCGTACTTG TTTCGATTAT TCTGATGTTC 
GAGTTCATTT GTATGTCGCT TTACGCCACA GGTGGCAAAG GCTTGAAGCG TTTGCTGGGG 
CAATCAAAAA ACGTCCGCTT GATGAACCGA ATCGCTGGCA CCTTGATGAT GGGTGTGGGT 
GTATGGCTGT TGATGAGTTA A
 
Protein sequence
MNTALLTMFI PTFFFVSITP GMCMTLALTL GMSIGYRRTL WMMAGELVGV ALVSVSAVLG 
IAAIMLNYPW LFTALKLIGG GYLLYLGIEM WRSRGKLAIN VENVGVPTSG NWDLVLQGFV 
TAIANPKGWA FMIPLLPPFI NQNAALAPQL IVLVSIILMF EFICMSLYAT GGKGLKRLLG 
QSKNVRLMNR IAGTLMMGVG VWLLMS