| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05362 |
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| Symbol | secF |
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| ID | 5556810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 592253 |
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| End bp | 593155 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640909839 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001447494 |
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| Protein GI | 156976588 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGAAA TGCTAAAACA AAATATCCGT AAGATTCGTT ACTTCACGAC TGCTGTATCG
GTAGTTCTAA CGATTATTGC TCTTGTTGCT CTGGGAATGA AAGGGCTTAA CCTAGGTCTA
GACTTCACTG GTGGTATGGT TACTGAAGTG AAAGTCGATA AACAATTGAC TAACTATGAT
CTGCTTAACG CACTTCAACC AAAGCTTGGC GAATCAACAT CAGTCACGCG TTCAGGTGAA
GATGGCCGTT GGGTGATTCG TTACTCTGCA CCTGCAGAAG GTCAAACACT ACCGAGCGTA
GCAGATGTGC TTAAACCAAT CTCACACCAA GTTGATGTGG TAAGTAACAG CATCGTTGGT
GCTCAAGTAG GTCAAGATCT GTTTGATCAA GGTGGTTTAG CACTATTGAT TTCAGTACTG
ACGATTCTTG GTTACTTGTG TTTCCGCTTT GAGTGGCGTT TGGCAAGTGG TTCGCTGTTT
GCTCTGGCAC ACGACGTTAT CTTAGTCCTC GGCTTCTTTG CAATCACGCA AATGGAGTTC
AACCTAACGG TGTTTGCGGC GATTCTGGCA ATTCTTGGCT ACTCGTTGAA TGACTCGATC
ATCATCGCAG ACCGCATTCG TGAACTGCTG GTGGCTAAGC AAAACTGGAA AACAGAGCAA
ATCAACGACG AAGCAGTACT GGCGACATTC TCACGTACTA TGGTGACGTC AGGTACTACT
CTGATCACCG TTGGCGCGCT GTGGATTATG GGCGGCTCAG CTTTGGCTGG CTTCTCGACT
GCAATGTTTA TCGGCGTACT ATCTGGTACG TGGTCATCTA TCTCGATTGG TACGGTGCTT
CCTGAATGGT TGAAGCTAGA ACCAAAACAC TACCTACCAG TAGAGATCGA CACTGCACCA
TAA
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| Protein sequence | MVEMLKQNIR KIRYFTTAVS VVLTIIALVA LGMKGLNLGL DFTGGMVTEV KVDKQLTNYD
LLNALQPKLG ESTSVTRSGE DGRWVIRYSA PAEGQTLPSV ADVLKPISHQ VDVVSNSIVG
AQVGQDLFDQ GGLALLISVL TILGYLCFRF EWRLASGSLF ALAHDVILVL GFFAITQMEF
NLTVFAAILA ILGYSLNDSI IIADRIRELL VAKQNWKTEQ INDEAVLATF SRTMVTSGTT
LITVGALWIM GGSALAGFST AMFIGVLSGT WSSISIGTVL PEWLKLEPKH YLPVEIDTAP
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