Gene VIBHAR_05351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05351 
Symbol 
ID5556536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp579654 
End bp580751 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content42% 
IMG OID640909828 
ProductABC-type sugar transport system periplasmic protein 
Protein accessionYP_001447483 
Protein GI156976577 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG CGTTACTATT TTCCCTGATT TCTATGGTCG GTTTTTCTCC AGCGTCTCAA 
GCAACACAAG TTTTGAATGG GTACTGGGGT TATCAAGAGT TTTTGGACGA GTTTCCCGAG 
CAACGAAATC TGACCAATGC TTTATCAGAA GCAGTACGAG CACAGCCGGT CCCACTGTCT 
AAACCGACAC AACGCCCGAT TAAAATATCA GTGGTTTACC CAGGACAGCA AGTTTCAGAT 
TACTGGGTAA GAAATATTGC ATCATTCGAA AAACGTTTGT ATAAGTTGAA TATTAACTAC 
CAACTGAACC AAGTGTTTAC TCGTCCAAAT GCTGATATCA AGCAACAAAG CTTGTCATTA 
ATGGAAGCGC TCAAGAGCAA ATCGGATTAC TTGATTTTCA CGCTTGATAC GACAAGACAC 
CGTAAATTTG TTGAGCACGT TTTGGACTCA ACGAACACCA AATTGATCTT GCAAAATATC 
ACTACACCAG TCCGTGAGTG GGACAAACAT CAACCGTTTT TATATGTCGG ATTTGACCAC 
GCAGAAGGCA GTCGTGAATT AGCAACAGAA TTCGGAAAGT TCTTCCCAAA ACACACATAT 
TACAGTGTGC TCTACTTTTC TGAAGGTTAT ATTAGCGATG TGAGAGGTGA TACTTTTATT 
CACCAAGTAA ACCGTGATAA TAACTTTGAG CTACAATCAG CGTATTACAC GAAGGCAACC 
AAGCAATCCG GCTATGATGC TGCGAAAGCG AGTTTAGCAA AACATCCAGA TGTTGATTTT 
ATCTATGCAT GTTCGACCGA CGTAGCATTA GGTGCAGTAG ACGCACTGGC TGAGTTGGGA 
CGTGAAGATA TTATGATCAA TGGCTGGGGT GGAGGCTCTG CTGAGTTAGA CGCTATCCAG 
AAGGGTGATT TAGACATCAC CGTCATGCGT ATGAATGATG ACACTGGCAT AGCCATGGCA 
GAAGCGATTA AGTGGGACTT GGAAGATAAA CCAGTTCCGA CCGTATACTC AGGTGACTTT 
GAAATCGTAA CAAAGGCAGA TTCACCGGAG AGAATCGAAG CGCTGAAAAA GCGCGCATTT 
AGATATTCAG ATAATTGA
 
Protein sequence
MKKALLFSLI SMVGFSPASQ ATQVLNGYWG YQEFLDEFPE QRNLTNALSE AVRAQPVPLS 
KPTQRPIKIS VVYPGQQVSD YWVRNIASFE KRLYKLNINY QLNQVFTRPN ADIKQQSLSL 
MEALKSKSDY LIFTLDTTRH RKFVEHVLDS TNTKLILQNI TTPVREWDKH QPFLYVGFDH 
AEGSRELATE FGKFFPKHTY YSVLYFSEGY ISDVRGDTFI HQVNRDNNFE LQSAYYTKAT 
KQSGYDAAKA SLAKHPDVDF IYACSTDVAL GAVDALAELG REDIMINGWG GGSAELDAIQ 
KGDLDITVMR MNDDTGIAMA EAIKWDLEDK PVPTVYSGDF EIVTKADSPE RIEALKKRAF 
RYSDN