Gene VIBHAR_05339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05339 
Symbol 
ID5556778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp571267 
End bp571830 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID640909816 
Productputative threonine efflux protein 
Protein accessionYP_001447471 
Protein GI156976565 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCAG GTCCGAGTTT AGCGATTGTC GCTAAGCACT CGTTGGCTGG TGGTCGAGTT 
AATGGTTTGG CTACCGCATG GGCGCACGCG TTTGGTATCG GTATTTATGC GTTTATTACC 
TTGATAGGTT TGGCGGTAGT GCTGCAACAA AGCCCATTGC TATTTAAGAC TATTAGCTTG 
GCTGGTGCAG CTTACTTGGC GTATCTTGGC TTCAATGCAC TGCGCTCAAA AGGTGGGGTT 
GCGGCGAAGT TAGAGTCCGG TGAAGAAACG ACGGTTTTAC AATCGGCGCG AGAAGGCTTC 
CTCATTTCAA TTCTAAGCCC GAAAATTGCG CTGTTCTTCA TCGCACTGTT CAGTCAATTT 
GTAGCGCTGG GTAACGATCT AAGTAACCAA ATGATCATCG TCGCGACACC ATTTGTTGTT 
GATGGCTTGT GGTACACCTT CATAACATTG GTATTGTCTA ACTCGCGCGT TGTGGACCGT 
ATTCGCTCAA AAGCGGTGCT GATTGACCGA TTATCCGGTA TCGTTTTAAT GCTACTGGTA 
GTGCGAGTAG TTGTGACGAT TTAA
 
Protein sequence
MSPGPSLAIV AKHSLAGGRV NGLATAWAHA FGIGIYAFIT LIGLAVVLQQ SPLLFKTISL 
AGAAYLAYLG FNALRSKGGV AAKLESGEET TVLQSAREGF LISILSPKIA LFFIALFSQF 
VALGNDLSNQ MIIVATPFVV DGLWYTFITL VLSNSRVVDR IRSKAVLIDR LSGIVLMLLV 
VRVVVTI