| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05325 |
|---|
| Symbol | |
|---|
| ID | 5556741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 558408 |
|---|
| End bp | 559610 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909802 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001447457 |
|---|
| Protein GI | 156976551 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAG GTTTAGCGGT ATGGGCACTC TTCATCTATC TGCTCCGTTT AGTCGGCATG
CCTTGGAACA AAGCAACCAA ATCGTTCGCT TACCTAGGCG GCTTGGGGTG GTTAATGTTC
GTCTGGGTAG GCCTCATCAA CTTCACGCCG ATGGATCTAT CCGGCGGCTC AGTGGTGCAG
TCACCACACA TCCAGTTGCG TCCGGATTCA ACCAATGTGA AAGGCAAAGT TGACCATATT
TATATCAAGC CAAATCAACA AATTGAAAAA GGTCAGCTCA TTTACGAACT CGACCCAACG
CAATATGAGA TCGCATTGAA CCAAGCAAAT GTGTCGGCAG ATTCTGCTCG AGTAGCACTG
GCAACAGCAC AAGGTGATAT CGAGATTGAA GAAGCAAACC ATCAAGCACT GGTGCAAGAT
CTAGAAACGT CAAAAAGCCA ATTGGAAGCG GCGAAAGTTG ACTATAAATT GCAGAAAAAG
ATGCTGAATC GTTACGTTGA ACAAAACCAA GTAGTCCAAA ACACCATTAC GGCAAGCGAC
ATCGACAAAC AATCGAGTGC CGTTGATATA GCACGCCACA ACGTGTTAAC TCTTGAATCT
CAAATCAAGA AGAAACAAGT CGATATCTCA CGTGCAAAAC TGGCGATTCA TAAAGCTGAG
CTCGCGGTTG AAACCAAACA GGCTGAACTG CGCCAAGCGG AAGAGCAAAT CGCAAAAGCA
CAATGGGATT TGAACAGCAC CAAAGTGCAC GCACCAGCAG ATGGCTTTGT AACCAACTTT
ATCCTGCGTG AAGGCCAGCG TGTATCGATG ATGCCGCGTA TCAACATGTA CACTAACGAG
AAGTACGTTC TGATGCGAGT GAACCACCAA GCAATTCGTA ATATCAAACC AGGTCAACCT
GCTGAATTTT CTTCTTCGGT TTACCCTGGC AAGATCTTCT CTGCAACAGT AGAGGGCATT
GTTGAAGCGA CCGGCGAATC ACAAGGCAAC CTACTTGGTC TGGATGATTC CGTTCGCGCT
ACAACCGGTA AGAACTTGCA GAACAAAATT GATGAGCCAG AAGGCTACGA TATCCCTGTC
GGCTCAGTTG GTCTAGCATG GGTCAGCGGC GAGAAACCAA TTGGTTTCCT AGCGTTCTTG
GATGTGATTC GTGGCATCAT CATCCGAATG AAGTCGCAAC TGTACTTCTT CTACTCTATC
TAA
|
|---|
| Protein sequence | MLEGLAVWAL FIYLLRLVGM PWNKATKSFA YLGGLGWLMF VWVGLINFTP MDLSGGSVVQ
SPHIQLRPDS TNVKGKVDHI YIKPNQQIEK GQLIYELDPT QYEIALNQAN VSADSARVAL
ATAQGDIEIE EANHQALVQD LETSKSQLEA AKVDYKLQKK MLNRYVEQNQ VVQNTITASD
IDKQSSAVDI ARHNVLTLES QIKKKQVDIS RAKLAIHKAE LAVETKQAEL RQAEEQIAKA
QWDLNSTKVH APADGFVTNF ILREGQRVSM MPRINMYTNE KYVLMRVNHQ AIRNIKPGQP
AEFSSSVYPG KIFSATVEGI VEATGESQGN LLGLDDSVRA TTGKNLQNKI DEPEGYDIPV
GSVGLAWVSG EKPIGFLAFL DVIRGIIIRM KSQLYFFYSI
|
|---|
| |