Gene VIBHAR_05301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05301 
Symbol 
ID5556942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp537253 
End bp538041 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content35% 
IMG OID640909778 
Productcitrate lyase ligase 
Protein accessionYP_001447434 
Protein GI156976528 
COG category[C] Energy production and conversion 
COG ID[COG3053] Citrate lyase synthetase 
TIGRFAM ID[TIGR00124] [citrate (pro-3S)-lyase] ligase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGA ACGAAGTTGG GGATAGAATT CTTTCAAAAT TAGTAAGCCG ACCAACGGTT 
CAATCAGTTT GTGCTCTCAC AGCTAATCAG AATGAAAGCG ATTTCTATAA AATATTGGAT
AATTTTAAGT ACTTTTTATT TAAACACGTG GCTCGAACAT TAGAGTCTTG TGAAATGAAA
AGTTATTTAT CTTTACTAGA GCAATATATT CCAGATGATG GGGTTAATGT CGGTAGCATT
GCTGTAAATT GTAATCCTAT CACAAATGGT CACATGTATT TGATTGATTA TGCTTCTAAG
AAAGTTGATA AGCTATTTAT TTTTGTTATT GAAGAGGACT TGTCTTTCTT TAAGTTTAAA
GACCGCTTAC AACTTGTTCA TGATAGCTCT CGACATTTAG AAAATGTAAC GGTACTCCCC
GGCGGGAAGT TTATTTGTAC TGAACTTACT TATCCAGATT ACTTTGATAA AGATGCAAAA
AGTGAAGTTG TGGCTGATGC TTCTATGGAA GCTTGGTTCT TTTGTGAGTT TATTGCTAAG
AAATTAAATA TTAGCAAGAT TTTCTTGGGT GATGAGCCAA CCTGTAAAGT AACCAAGCAG
TACAACCAGA AAATGCAAGA GCTGTTGCCT GAATACAATA TTGACGTGGA TATTATTGAA
CGTATTTCAA CAGGTGGTCG AGTCATAAGT GCTTCTACAG TTCGTAAATT ACTAGAAGAA
AGAGATTTTG ACTCAATTAA GCCACTAGTG CCGACTCCGA CATATAAGTT TTTGATGGCT
AATTATTGA
 
Protein sequence
MMANEVGDRI LSKLVSRPTV QSVCALTANQ NESDFYKILD NFKYFLFKHV ARTLESCEMK 
SYLSLLEQYI PDDGVNVGSI AVNCNPITNG HMYLIDYASK KVDKLFIFVI EEDLSFFKFK
DRLQLVHDSS RHLENVTVLP GGKFICTELT YPDYFDKDAK SEVVADASME AWFFCEFIAK
KLNISKIFLG DEPTCKVTKQ YNQKMQELLP EYNIDVDIIE RISTGGRVIS ASTVRKLLEE
RDFDSIKPLV PTPTYKFLMA NY