Gene VIBHAR_05288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05288 
Symbol 
ID5556866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp526815 
End bp527747 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content46% 
IMG OID640909765 
Productoxidoreductase 
Protein accessionYP_001447421 
Protein GI156976515 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG GCATCATTGG CTTGGGTGAT ATCGCTCAGA AAGCCTACCT ACCTGTTATC 
ACTCAACTTC CAAACGTTGA ACTCGTATTT TGTACCCGCA ACGCGAACAC ACTTAACACC
CTCTCACAAC AATATCGAAT AGCAGAAACC TGCCTAGACT ATCGACAACT GGTTGGTATG
GGTGTAGATG CGGTCATGAT TCACGCTGCT ACCCACGTTC ACCCTCAAAT TGCCGCTTTC
TTTTTAGAAC AAGGCATCCC GACCTTCGTC GATAAACCTT TAGCTGATAG CGCCGCAGAG
GTAGAAAAGC TTTACGATCT TGCAGAGCGC GTGAAACAGC CTTTATATAT TGGTTTTAAT
CGCCGTCATA TTCCGCTCTA CAACCAGCAT ATGTTTGGAG TACAGCGAGG CGAACTTTCA
GGCCTGAAAT CACTGCGCTG GGAGAAGAAC CGTCATCAAT TACCCGGTGA TATTCGCACG
TTCATTTTCG ATGACTTTAT CCACCCTCTA GATAGTATAA ACATCACGGC TAAAGCCGAT
CTGCAAAACG CCTACATCAC ACATCAAATG GATGGTGACC AGCTGGCGCG CCTTGATATC
CAATGGCAGC ATGGTGACAC ACTGCTTCAT GCTTCAATGA ACCGCCACTT TGGTATCACG
ACGGGGCGTG TTCAAGCTTG CTACGCAAAC AAAGCGATGG AGTTTGATTC GTTTGTTGAA
GGGAACCTGT GGCAAGATAA TCAGGAGCAG AAATTGAGCT TAAAAGATTG GACACCAATG
CTAACAAGTA AAGGTTTCCA CTCTATGTTG CTAAACTGGT TTGAAGTGAT TCAATCAGGC
AACATCGCAA CTGAAATCGT CGCACGCAAT ATTGCTAGCC ACCAACTTGC AGAAGCGATT
TGTCAGCATA TTGAACAAGC CGTGCATCGA TAA
 
Protein sequence
MKIGIIGLGD IAQKAYLPVI TQLPNVELVF CTRNANTLNT LSQQYRIAET CLDYRQLVGM 
GVDAVMIHAA THVHPQIAAF FLEQGIPTFV DKPLADSAAE VEKLYDLAER VKQPLYIGFN
RRHIPLYNQH MFGVQRGELS GLKSLRWEKN RHQLPGDIRT FIFDDFIHPL DSINITAKAD
LQNAYITHQM DGDQLARLDI QWQHGDTLLH ASMNRHFGIT TGRVQACYAN KAMEFDSFVE
GNLWQDNQEQ KLSLKDWTPM LTSKGFHSML LNWFEVIQSG NIATEIVARN IASHQLAEAI
CQHIEQAVHR