| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05258 |
|---|
| Symbol | |
|---|
| ID | 5557003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 506643 |
|---|
| End bp | 507758 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640909735 |
|---|
| Product | penicillin acylase |
|---|
| Protein accession | YP_001447391 |
|---|
| Protein GI | 156976485 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3049] Penicillin V acylase and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGAA TTACACGTAA TAATGACCTC GTATTGAAAC GTTACGAGGG CAATTCAATG
AAAGGTTTTA GCAAAAAAGT TCTTCTAGCA GCATCTGTTG CAATGGCAGT TGGCAGCATC
TCTACCGCAG CAAATGCGTG TTCACGTTTG GTTTGGGAGA CTCAAGACCA CGGTGTATTT
GTCTCTCGTA CCATGGATTG GATGGAAGCC AATCAGCCAA CCATTGATGT TCGTCACGCA
GGCCAAACCT ACCGCGGCTA CGATAAAGAT GATGCGCTTA CGTGCACATC GAAATACGCT
TCTATCGGTG TAAGTATTTA CGGCGTGGGC ATTATTGATG GCTTTAACGA GAAAGGCTTT
GCGGCGAATG CCCTGTTCTT GGATGAAGAA AACCCAGGGG CACCACAAGC TGGCAAACAA
CAAATTGAAA ACTCGCGTTT TGTCGCCTAT TTGATTGATA GCTTTGCATC CGTTGATGAA
GCATTGAAGA ATCTAGCTTC AATCCAAATC CAACAGTTCA GCCACAATGG CATCGAAATG
AAGGGACATT ATTCATTAGA AGACGCAAGT GGTGACTCTG CTGTGTTGGA ATACATCGAC
GGCGCATGGC AAGTTCATCA TGGCAAACAA TATGACGTGA TGACTAACAG CCCAGAGTAC
GCGCAACACT TGAAAAACTG GCAAGAAGCG CAACCAAAAG CGAAGAGTGA TGTGAATGGT
GAGTTCCCGA TCCCAGGTAA CATTAATTCT GCTCAACGCT TTATCTGGAA CAGCTACATG
AAGGACCAAC TTAAAGAGCC TAGCAGCTAC ACCAACGGCA TTGCGAAACT GGATAGTGTG
ACCTATAAAA TCCCATTGGA TGCGGCAAAC CGCCCAGTGA ATGGCGAAAT GCGTGGCTAC
GCAACCATCT ATGGTTTGGT GTACAACCTA GACCAAAAAG TAATGAACGT GCGTTACCAG
TATGACGACA GTTACACGCA GTACTCAGTG GACTTTAATA AGTTGAATGA CGGCCATAAC
TACACCATCA AAGCCGATTT ACCGGATCTG TTTGGTGACA TTTCATCTCG CTTAGAAAAA
GGCGATGGCG TAATGGGTCA ACACTTAGTG AAATAA
|
|---|
| Protein sequence | MVRITRNNDL VLKRYEGNSM KGFSKKVLLA ASVAMAVGSI STAANACSRL VWETQDHGVF
VSRTMDWMEA NQPTIDVRHA GQTYRGYDKD DALTCTSKYA SIGVSIYGVG IIDGFNEKGF
AANALFLDEE NPGAPQAGKQ QIENSRFVAY LIDSFASVDE ALKNLASIQI QQFSHNGIEM
KGHYSLEDAS GDSAVLEYID GAWQVHHGKQ YDVMTNSPEY AQHLKNWQEA QPKAKSDVNG
EFPIPGNINS AQRFIWNSYM KDQLKEPSSY TNGIAKLDSV TYKIPLDAAN RPVNGEMRGY
ATIYGLVYNL DQKVMNVRYQ YDDSYTQYSV DFNKLNDGHN YTIKADLPDL FGDISSRLEK
GDGVMGQHLV K
|
|---|
| |