Gene VIBHAR_05257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05257 
Symbol 
ID5557002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp505541 
End bp506539 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content47% 
IMG OID640909734 
Producthypothetical protein 
Protein accessionYP_001447390 
Protein GI156976484 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC GAGCGAGTCA ATTCACTGTG CCTCAGAGTT GGAAAGTGCT GCTTAACGAT 
ATGGATATTG ATCCGCAACT GGTGCTGGCA TACGCCAAGT TACCTGCCGA CCTGTTCAAT
CGAGAAAAGG CAACGCTTAG CCCAAATGAG TACTTTCAGC TTTGGGTTGG AGTTGAGCAA
GCGTCCGGAG AGCGCGAGAT GCCGTTGCTC CTTGCTGAAC ATATGTCGGT TGAGGGATTT
GATGCCCCAA TTTTTGCCGC TATTTGCAGT CCGAACTTGA ACACCGCACT CAAACGGATT
CAGCAATATA AGCCGTTGAT TGGACCTATG GTAATGACGT TAGACGTTTC CGATAAAGAA
ACAAAACTCA GCATCAGTTG CTATGGCCAA CGACAAGCTC TACCCAAATC TTTGGCTTTG
ACAGAAGTGG TGTTCTTTAC CCAGTTAGCA CGTTTAGCGA CGAGAAAGCG GATTCAACCG
CTACAAGTTA CTTTACCTGA GCTTCCCAAC AACCTTGAGA AATACCTAGC TTACTTTGGT
TGCCCGTTGG TCAAAGGTGA TGGCGTAGAG GCGCGTTTTA AAGCGGAAGA TGCAGTGCAT
CCGTTCATGA CTTTAAATGC GCAAATGTGG GGCTTTTTCG AACAAGGGTT GAACCAGAAA
CTCAAAGATC TTGACGCCAG CGCCTCAACA GTTGAACGTG TTCGAGCAGT CTTGAGCGAG
TCATTACCCG CGGGGAACAG TGCTATTGAA ATGGTGGCAG AGAAACTGGC AATGAGTAAA
CGTACATTGC AACGTAAGCT CACGGCAGAA GCTGAAAGTT ATCAATCCGT GCTGCAAATG
GTACGGGCGG AGCTTGCCGA TCACTATTTA GAGAAGTCTC AAATGTCACT GGGTGAAATC
TCCTTCCTAC TGGGATTTCA AGAAGCGAAC TCATTTATTC GAGCTTACAG CGCTTGGAAG
GGAATATCTC CCGGGCATTA TCGAGACCAG TGTCATTAA
 
Protein sequence
MIKRASQFTV PQSWKVLLND MDIDPQLVLA YAKLPADLFN REKATLSPNE YFQLWVGVEQ 
ASGEREMPLL LAEHMSVEGF DAPIFAAICS PNLNTALKRI QQYKPLIGPM VMTLDVSDKE
TKLSISCYGQ RQALPKSLAL TEVVFFTQLA RLATRKRIQP LQVTLPELPN NLEKYLAYFG
CPLVKGDGVE ARFKAEDAVH PFMTLNAQMW GFFEQGLNQK LKDLDASAST VERVRAVLSE
SLPAGNSAIE MVAEKLAMSK RTLQRKLTAE AESYQSVLQM VRAELADHYL EKSQMSLGEI
SFLLGFQEAN SFIRAYSAWK GISPGHYRDQ CH