Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05257 |
Symbol | |
ID | 5557002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 505541 |
End bp | 506539 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909734 |
Product | hypothetical protein |
Protein accession | YP_001447390 |
Protein GI | 156976484 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC GAGCGAGTCA ATTCACTGTG CCTCAGAGTT GGAAAGTGCT GCTTAACGAT ATGGATATTG ATCCGCAACT GGTGCTGGCA TACGCCAAGT TACCTGCCGA CCTGTTCAAT CGAGAAAAGG CAACGCTTAG CCCAAATGAG TACTTTCAGC TTTGGGTTGG AGTTGAGCAA GCGTCCGGAG AGCGCGAGAT GCCGTTGCTC CTTGCTGAAC ATATGTCGGT TGAGGGATTT GATGCCCCAA TTTTTGCCGC TATTTGCAGT CCGAACTTGA ACACCGCACT CAAACGGATT CAGCAATATA AGCCGTTGAT TGGACCTATG GTAATGACGT TAGACGTTTC CGATAAAGAA ACAAAACTCA GCATCAGTTG CTATGGCCAA CGACAAGCTC TACCCAAATC TTTGGCTTTG ACAGAAGTGG TGTTCTTTAC CCAGTTAGCA CGTTTAGCGA CGAGAAAGCG GATTCAACCG CTACAAGTTA CTTTACCTGA GCTTCCCAAC AACCTTGAGA AATACCTAGC TTACTTTGGT TGCCCGTTGG TCAAAGGTGA TGGCGTAGAG GCGCGTTTTA AAGCGGAAGA TGCAGTGCAT CCGTTCATGA CTTTAAATGC GCAAATGTGG GGCTTTTTCG AACAAGGGTT GAACCAGAAA CTCAAAGATC TTGACGCCAG CGCCTCAACA GTTGAACGTG TTCGAGCAGT CTTGAGCGAG TCATTACCCG CGGGGAACAG TGCTATTGAA ATGGTGGCAG AGAAACTGGC AATGAGTAAA CGTACATTGC AACGTAAGCT CACGGCAGAA GCTGAAAGTT ATCAATCCGT GCTGCAAATG GTACGGGCGG AGCTTGCCGA TCACTATTTA GAGAAGTCTC AAATGTCACT GGGTGAAATC TCCTTCCTAC TGGGATTTCA AGAAGCGAAC TCATTTATTC GAGCTTACAG CGCTTGGAAG GGAATATCTC CCGGGCATTA TCGAGACCAG TGTCATTAA
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Protein sequence | MIKRASQFTV PQSWKVLLND MDIDPQLVLA YAKLPADLFN REKATLSPNE YFQLWVGVEQ ASGEREMPLL LAEHMSVEGF DAPIFAAICS PNLNTALKRI QQYKPLIGPM VMTLDVSDKE TKLSISCYGQ RQALPKSLAL TEVVFFTQLA RLATRKRIQP LQVTLPELPN NLEKYLAYFG CPLVKGDGVE ARFKAEDAVH PFMTLNAQMW GFFEQGLNQK LKDLDASAST VERVRAVLSE SLPAGNSAIE MVAEKLAMSK RTLQRKLTAE AESYQSVLQM VRAELADHYL EKSQMSLGEI SFLLGFQEAN SFIRAYSAWK GISPGHYRDQ CH
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