Gene VIBHAR_05254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05254 
Symbol 
ID5557095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp502949 
End bp503938 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content50% 
IMG OID640909731 
Productoxidoreductase 
Protein accessionYP_001447387 
Protein GI156976481 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGA TCACTTACCA AAAAGATCAA GATACCTTCA CCTATACCGA CATCGACACT 
CCAGCGCTTG CGAGTGGGTT AGATGTGTTA GTAAAAGTTC ATGCCGTTGG GCTCAACCCT
GTCGATGCGA AAGTGAATCT TTGGCACGAG ATGGTCGATG GCATGGACGA TACTTTCGTT
GGTGGCCTCG ATGTTTCGGG GGAAATCGTT GCCATCGGTG ACAAGGTATC GGGTTGGCAG
GTAGGTGATC GCGTTCTCTA TCATGGCAAC ATGCGTCGAA TGAGCGGTGG TTTCGCCGAA
TACGCAATTC AAGACTCACG TACGTTGATT GCCCACCCTG ATGTCGCTCC TGAAGTCGCA
GCCGCTTCAC CTTGCGCGGG CTGGACGGCC TATCGAGCGC TTGTTGATAA ACTGAACATT
TCTACGCGTA AGAGCATTTT TATTGCTGGT GGTTCTGGTG GCGTGGGTAG TTTTGCCATT
CAACTCGCTC GCTTCTTCGG TGTAGAAACC ATCATCACTA CAAGCTCTGG GGCAAACCAC
GAGTTTGTGC GTTCGTTGGG TGCAACACAC GTCATTGACT ACAAACAAGA GGATGTACGT
GAGCAGATCA TGGCTATCAC TGAAGGCTTT GGCGTAGAGG TATCATTGGA CTGCGTTGGC
GGCGACAACG ACATTCTGTG TGCTTCTGTG CTTGGTTTTG AAGGTGAAAT GGTAGAGCTA
GTAAGAACAA CGCGTGCAAC CGAATACCCA GGAGCCTTTT TGCAAGGGCT CACCTTCCAC
CAACTGAGCT TAGGCTCTGG TCATGTTCAC GGTGAAAAAG GTTTTGCTTC TATCGTTAAC
GCTGGGGTGG AATTCTCCCA CATGCTAGAA CGTGGTGAAG TCATGGTGCC TAAATTGGAA
GTCGTCGCAT TAAAAGACGT CGCTCAAGCT CTAGTGTCTA TTCGTCAGCA ACGAACGGTC
GGAAAGATCG TCGCTAAACT CGTCGACTAA
 
Protein sequence
MKAITYQKDQ DTFTYTDIDT PALASGLDVL VKVHAVGLNP VDAKVNLWHE MVDGMDDTFV 
GGLDVSGEIV AIGDKVSGWQ VGDRVLYHGN MRRMSGGFAE YAIQDSRTLI AHPDVAPEVA
AASPCAGWTA YRALVDKLNI STRKSIFIAG GSGGVGSFAI QLARFFGVET IITTSSGANH
EFVRSLGATH VIDYKQEDVR EQIMAITEGF GVEVSLDCVG GDNDILCASV LGFEGEMVEL
VRTTRATEYP GAFLQGLTFH QLSLGSGHVH GEKGFASIVN AGVEFSHMLE RGEVMVPKLE
VVALKDVAQA LVSIRQQRTV GKIVAKLVD