Gene VIBHAR_05246 details

Gene Information

• Locus tag: VIBHAR_05246
• ID: 5557154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 497230
• End bp: 497745
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640909723
• Product: oxygen-independent coproporphyrinogen III oxidase
• Protein accession: YP_001447379
• Protein GI: 156976473
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3721] Putative heme iron utilization protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA CAATGGAATC AATTAAACAA CAGGTCGAAG CCCTACTAGA ACAAGAGCCG 
CAACTACTTC CTGCACCAAT GGCTGAGCGC CTTGGTGTAT CAGAGTTTGA AGTGGTAGCT 
GCACTTCCTC AAGAGATGGT TGCAGTAGCT CCTGGTGAGC AAGCACAAAG CATTTTAGAA 
GGTCTTGTTG GTTTTGGCCC AGTAACAACT ATCGTTCATT CTTTTGGTTC TATCTTTGAA 
GTAAAAGCGC CGTTCCCGAA AGGTAAAGTT GCTCGTGGTT ACTACAACCT TATGGGCAAA 
GAAGGTGAAC TTCATGGTCA CCTAAAACTG GATAACGTGA AAAACATCGC GCTAGTAAGT 
AAACCGTTTA TGGGACGTGA GAGCCATTAC TTTGGTTTCT TCTCTGAGTG TGGCAGCAAC 
ATCTTTAAGA TTTACCTAGG CCGCAACGAG AAGCGTGAGC TAATCGAAGA TCAAGTAACA 
GCATTCCGTG CAATGCAAGC AGAGTTCAAC AAGTAG 

 

Protein sequence

MEKTMESIKQ QVEALLEQEP QLLPAPMAER LGVSEFEVVA ALPQEMVAVA PGEQAQSILE 
GLVGFGPVTT IVHSFGSIFE VKAPFPKGKV ARGYYNLMGK EGELHGHLKL DNVKNIALVS 
KPFMGRESHY FGFFSECGSN IFKIYLGRNE KRELIEDQVT AFRAMQAEFN K