Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05243 |
Symbol | |
ID | 5556996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 494252 |
End bp | 494950 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909720 |
Product | biopolymer transport protein |
Protein accession | YP_001447376 |
Protein GI | 156976470 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGC TACAACATTT ACAAACCCAA TTTGGTCTTA TGACTTGGCC TTTAATGATT TGCTCTGCAC TTACAGTCAT GATCATTGCG GAAAGACTCT TTCAAGTATT CATTAGCTTA GGCGTGGGGA AGCGTGCAAT TCGTCAAAAG CTGACCAATC TTGATCCAAC CAACAACAAA GATATTGAAG CGCTAGCGGA CGAGCTTTCT GGCAAACGCC CTCTACTCTA TCGCGGTGTC GCTATGTTGC TCGCTCACCA CTCTTTTTCT AAATCATTAC GTGAGGATGC CGCAGGCATT TGGCTTCAAG AAAAGCGTCA TCAGCTGCAC TCAGGCCTTC GCCTACTGAC GTTGATTGGC GTGATCAGCC CTCTGATTGG TCTGTTAGGA ACAGTACTTG GCCTAATCGA CATGTTTAAA GGTATTGCCT CTTCCACGGG CAACATCACA CCAAATGATT TGGCTGATGG TCTAGGCCTT GCGATGCGCA CGACAGCAGC AGGTTTGATC ATTGCATTAC CAGCCATTTC TGGCGCGCAG CTTATTGGCC TTTGGGCTGA TCGTGTTATC GCTAAGCTTG AGCATACGCT CAACTATGTG AACCTTTGGC TTGAAGGCAT TTCTCTGCAA CACGTTTCTC CAGAAAGCCA CAAAGAAATC GCGACTGTGG CAAATCATGT TGAAGCGAGA AGCTCATGA
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Protein sequence | MEQLQHLQTQ FGLMTWPLMI CSALTVMIIA ERLFQVFISL GVGKRAIRQK LTNLDPTNNK DIEALADELS GKRPLLYRGV AMLLAHHSFS KSLREDAAGI WLQEKRHQLH SGLRLLTLIG VISPLIGLLG TVLGLIDMFK GIASSTGNIT PNDLADGLGL AMRTTAAGLI IALPAISGAQ LIGLWADRVI AKLEHTLNYV NLWLEGISLQ HVSPESHKEI ATVANHVEAR SS
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