Gene VIBHAR_05243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05243 
Symbol 
ID5556996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp494252 
End bp494950 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640909720 
Productbiopolymer transport protein 
Protein accessionYP_001447376 
Protein GI156976470 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGC TACAACATTT ACAAACCCAA TTTGGTCTTA TGACTTGGCC TTTAATGATT 
TGCTCTGCAC TTACAGTCAT GATCATTGCG GAAAGACTCT TTCAAGTATT CATTAGCTTA
GGCGTGGGGA AGCGTGCAAT TCGTCAAAAG CTGACCAATC TTGATCCAAC CAACAACAAA
GATATTGAAG CGCTAGCGGA CGAGCTTTCT GGCAAACGCC CTCTACTCTA TCGCGGTGTC
GCTATGTTGC TCGCTCACCA CTCTTTTTCT AAATCATTAC GTGAGGATGC CGCAGGCATT
TGGCTTCAAG AAAAGCGTCA TCAGCTGCAC TCAGGCCTTC GCCTACTGAC GTTGATTGGC
GTGATCAGCC CTCTGATTGG TCTGTTAGGA ACAGTACTTG GCCTAATCGA CATGTTTAAA
GGTATTGCCT CTTCCACGGG CAACATCACA CCAAATGATT TGGCTGATGG TCTAGGCCTT
GCGATGCGCA CGACAGCAGC AGGTTTGATC ATTGCATTAC CAGCCATTTC TGGCGCGCAG
CTTATTGGCC TTTGGGCTGA TCGTGTTATC GCTAAGCTTG AGCATACGCT CAACTATGTG
AACCTTTGGC TTGAAGGCAT TTCTCTGCAA CACGTTTCTC CAGAAAGCCA CAAAGAAATC
GCGACTGTGG CAAATCATGT TGAAGCGAGA AGCTCATGA
 
Protein sequence
MEQLQHLQTQ FGLMTWPLMI CSALTVMIIA ERLFQVFISL GVGKRAIRQK LTNLDPTNNK 
DIEALADELS GKRPLLYRGV AMLLAHHSFS KSLREDAAGI WLQEKRHQLH SGLRLLTLIG
VISPLIGLLG TVLGLIDMFK GIASSTGNIT PNDLADGLGL AMRTTAAGLI IALPAISGAQ
LIGLWADRVI AKLEHTLNYV NLWLEGISLQ HVSPESHKEI ATVANHVEAR SS