Gene VIBHAR_05240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05240 
Symbol 
ID5556993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp491899 
End bp492936 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content49% 
IMG OID640909717 
ProductABC-type Fe3+-siderophore transporter permease 
Protein accessionYP_001447373 
Protein GI156976467 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTAA GACGTCTGCC TTTATCTACT ACCCTACTTG CGTTGTCTGG TGTTTTAGCC 
TTTATCGCAG TAGCGTCCAT AACCGTTGGT CCAATGAATA TAAGCTTCTC AGATAGCCTG 
AGAAGCTTAA CCGGAGCAGG TTCAGACCTT GCTCCTCACA TCCAACTCGT TATCAACGAA 
ATACGACTCC CGCGCACCAT TCTCTGTATG TTTATCGGTG CGATCCTCGC TATCTGTGGT 
GTCGTGATGC AGGGATTATT CCGAAACCCT CTTGCCGAGC CCGGCATCAT CGGCGTTTCC 
GCTGGTGCAG CACTTGGTGG TGCATTTGCC ATTGTCGTAT TTGCTGACTT TAGCCAAAAC 
TATCCGACAC TCATGAACTT GGCGGCGTTA CCATTCTTCG CTTTCTTGGG TGGCGCTCTT 
ACAACCGTAT TGGTTTACTG GCTAGGAACA AACAAGTTTG GTACGTCAGT AACCATCATG 
CTACTGGCTG GTGTCGCTAT CAGTGCACTA TCTGGTGCTG CTATTGGTTT TATGAACTTC 
ATCGCTGACG ACCAGATGCT GCGTGACTTA ACGCTTTGGT CGATGGGCTC GTTAGCAGGC 
GCCAACTGGT CAGGGATTGC TTTAGCAGCC GTGACACTAG TACTGCTGAT GTTCTGGTTC 
CAGAAAAAAG CCATGTCACT CAACGCATTG CTCTTAGGTG AGTCAGAAGC TAAGCATCTT 
GGCGTTCCCG TTCAAAAGCT TAAACGACAA CTTATCCTTT TATCGGCAGT GGGTGTTGGT 
ATCACGGTAA GTATTAGCGG TGCCATTGGC TTTATTGGCC TAGTGATACC TCACTTAGGT 
CGTATGCTTG CTGGTCCTGA CCATCGTACA CTGCTTCCTA TCTCAGCACT GATGGGCGCA 
TTGCTTCTTA CTGCGGCAGA TATGTTTGCT CGCGTAGTGG TGGCTCCTGC AGAGCTTCCT 
GTCGGTATCG TCACCGCTCT GATCGGCGCA CCGTTCTTTA TCTACTTACT GTTCCAACAA 
AAAGGGAAGA TTCTGTAA
 
Protein sequence
MLLRRLPLST TLLALSGVLA FIAVASITVG PMNISFSDSL RSLTGAGSDL APHIQLVINE 
IRLPRTILCM FIGAILAICG VVMQGLFRNP LAEPGIIGVS AGAALGGAFA IVVFADFSQN 
YPTLMNLAAL PFFAFLGGAL TTVLVYWLGT NKFGTSVTIM LLAGVAISAL SGAAIGFMNF 
IADDQMLRDL TLWSMGSLAG ANWSGIALAA VTLVLLMFWF QKKAMSLNAL LLGESEAKHL 
GVPVQKLKRQ LILLSAVGVG ITVSISGAIG FIGLVIPHLG RMLAGPDHRT LLPISALMGA 
LLLTAADMFA RVVVAPAELP VGIVTALIGA PFFIYLLFQQ KGKIL