| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05229 |
|---|
| Symbol | |
|---|
| ID | 5557192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 482489 |
|---|
| End bp | 484306 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909706 |
|---|
| Product | ferredoxin/oxidoreductase |
|---|
| Protein accession | YP_001447362 |
|---|
| Protein GI | 156976456 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG3217] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAT CAGTTTTATC CCAAATTAAT GTTTTTCCAG TCAAATCCGT AGGAGGCGTC
GCGCTGTCTT CCGCTTGGGT TGAAAAACAA GGATTAAGTT TTGATCGTCG ATTTATGATT
GCGACGTCAG ATGGCTCAAT GGTGACGGCC CGTAAATTCC CACAAATGGT GACCATCAAA
TCAGCGTTAT TGCCAGATGG TGTGGTGTTT ACCAGCCTTG GGGAAGATCC ATTAAAGATC
CGTTATCAAG ATTTCAAAAT GCAGGAAGCA CCCGCGACGG TTTGGAAAGA CAGTTTTACT
GCATACACCA CCACTGACGA AGCAGATGAT TGGTTTAGTA AAGTGTTAGG TCTTCGCGTT
GAGTTACTTT TTACTGGTGA GCAATCTAAT CGTGTAAGAG AGAAGTTGGG CCACAACGTT
AGCTTTGCTG ATGGCTATCC GGTGCTTGTG ATCAGTGAGG CGTCACTGGA AGAGCTAAAT
CGCAGAAGCT CTGAACAGCA CTCGATGGAC CAGTTTAGAA CCAACCTTGT GGTGTCCGAT
ACCAAGCCAT TTGAAGAAGA TTCATGGAAG CGCATTCGCA TTGGTGAAGT CGAATTTAAA
TCAGTGATAC CTTGTGAGCG TTGCATTCTA ACCACCGTTA ATACTCAACG TGGCACTTTC
CGCGAAAGCA AAGAACCGTT GAAAACACTG CAAGAGTTCC GTGCTAATGA ACGTGGTGGT
GTGTTCTTCG GCCAAAACCT TGTTGCCCTT AATGAAGGCA TTATTCGTCA GGGAGACAAG
GTAGAAGTGC TGGAATACAA AGAAGCTGAA TTCTATCCAG ATAACTCTCC TAATCGCATG
TCGCTCACCT GTGTCGAGCG AGAAGAGATT GCGCGCGACT TCGTCACCTT ATGGCTTGAG
CCAAGCAAAG GTCAGTTACC AACATACTTG CCGGGGCAGC ATTTGCCTAT TGAAGTGAAA
TTAGACGGTA AGAAAGTTGG GCGTCGTTAT ACGCTTTCTT CTAGTCCATC TCGTCCAGGT
CGTTACGCGA TTTCCGTTAA GCGTGTTTCT GGTGGTCGTG TATCTAACGC GTTACTGGAT
AACCTGCAAG TGGGGGATGT ATTGGAAGCG GAAACGCCAG ATGGTCAATT TCATCTAAAA
GAGCACTCTG TTCAGCCTCT ACTCTTGCTG TCTGCCGGTA GCGGTGTAAC GCCAATGCTG
TCGATGGTTC GCTACTTGGC GGATCACAAC CAACTCGATG ACGTGGTGTT CTACCATCAG
TGCAGTAGCG AGATTGATAT CCCGTGTAAA GATGAGTTAA ACGAACTAAA ACGCCAACAT
CCGGGCTTAG ATGTGAAGAT TTGCTTAACT CAGCCTGCGG TGGACTGGTT TGGTCTGAAA
GGGCGTATTA GCTTATCCCA TATCAAACAG ATCAAAGATG TTGAACAACG CCAAGTGTTC
GTTTGTGGCC CTGATGGTTT TATGCAGAAA GCGAAAAACC TTCTGCTGAA GAAAGGGTTA
CCTGAAGATA ACTACCATCA AGAAGCTTTT GGCGTTGCGG TTGCGACGAC CAAACCTGAG
AAAAGTGTTG AGATTGAATT CAACGGCTTG AAGTTGGCGG GTAACAACCA ACAAACATTG
CTGGAACAAG TCGAGAATGC CGGCAAGAGC ATCACGAACA GCTGCCGTGC GGGCTTGTGT
GGGGCATGTA AGGTTCAATT AGAGTCTGGG CAGGTTGTTC ATCCGGATGT ACCTGCATTA
AGCGCAGAAG AACGTGCAAT GGGTACAGTG CTCGCGTGTT GTGCTATTCC ACAAACGGAC
GTGACGCTAA CAGATTAA
|
|---|
| Protein sequence | MSQSVLSQIN VFPVKSVGGV ALSSAWVEKQ GLSFDRRFMI ATSDGSMVTA RKFPQMVTIK
SALLPDGVVF TSLGEDPLKI RYQDFKMQEA PATVWKDSFT AYTTTDEADD WFSKVLGLRV
ELLFTGEQSN RVREKLGHNV SFADGYPVLV ISEASLEELN RRSSEQHSMD QFRTNLVVSD
TKPFEEDSWK RIRIGEVEFK SVIPCERCIL TTVNTQRGTF RESKEPLKTL QEFRANERGG
VFFGQNLVAL NEGIIRQGDK VEVLEYKEAE FYPDNSPNRM SLTCVEREEI ARDFVTLWLE
PSKGQLPTYL PGQHLPIEVK LDGKKVGRRY TLSSSPSRPG RYAISVKRVS GGRVSNALLD
NLQVGDVLEA ETPDGQFHLK EHSVQPLLLL SAGSGVTPML SMVRYLADHN QLDDVVFYHQ
CSSEIDIPCK DELNELKRQH PGLDVKICLT QPAVDWFGLK GRISLSHIKQ IKDVEQRQVF
VCGPDGFMQK AKNLLLKKGL PEDNYHQEAF GVAVATTKPE KSVEIEFNGL KLAGNNQQTL
LEQVENAGKS ITNSCRAGLC GACKVQLESG QVVHPDVPAL SAEERAMGTV LACCAIPQTD
VTLTD
|
|---|
| |