Gene VIBHAR_05227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05227 
Symbol 
ID5557190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp480853 
End bp481881 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content48% 
IMG OID640909704 
Productdihydroorotase 
Protein accessionYP_001447360 
Protein GI156976454 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC TGACTATTAC TCGTCCTGAC GATTGGCACG TTCACTTACG CGATGGTGAA 
GTTCTAAAAG ATACCGTTCG CGATATTAGC CGTTACAACG GTCGAGCACT GATCATGCCG 
AACACCGTCC CACCTGTTAC CAATACTGAA ATGGCGCTAG CCTACCGTGA TCGAATCCTT 
GCAGAGCAGC ACGGTGAGCA ATTCGAGCCT CTTATGGCGC TGTACCTAAC AGACAACACT 
ACACCAGACG AAATCCGCAA AGCGAAAGCA ACAGGAAAAA TTGTTGCAGC AAAGCTTTAT 
CCTGCGGGCG CAACCACCAA CTCTGATTCT GGCGTAACCG ACGCAAAGAA CATCTACCAC 
GTTTTTGAAG CGATGGAAGA AGTTGGCATG CTGCTTTTGG TTCATGGCGA AGTGACCCAC 
AACCACGTTG ATATTTTTGA TCGTGAGAAG GAATTCCTAG ACACGGTTCT GGCTCCTATC 
GTGAACGACT TCCCCAACCT AAAAATCGTT CTTGAGCACA TCACGACTTC CGATGCGGCT 
AATTTCGTAA ACAACGCTTC TGACAATGTT GCAGCAACGA TTACCGCTCA CCACCTGCTG 
TTCAACCGTA ATCACATGCT AGTCGGTGGT ATTAAGCCAC ACTTCTACTG CTTGCCAATT 
CTTAAGCGTA ATACCCACCA ACAAGCGCTT ATCGAAGCAG CAACGAGCGG TAGCAAGAAA 
TTCTTCCTAG GTACAGATTC AGCACCACAC GCAAAAGGCG CAAAAGAGTC GGCTTGTGGT 
TGTGCAGGCT CTTACACAGC ACACGCAGCG CTAGAACTCT ATGCAGAAGT TTTTGAGAAT 
GAAGGCAAGC TAGAAAACCT AGAAGCATTC GCTAGTTTGA ATGGCCCTGA TTTTTACGGT 
ATCGCTCGTA ACACAGATAC TGTGACGCTA GAAAAAGCAT CTTGGGATGT ACCAGAAACG 
ATGCCGTTTG GTAGCGACAT CGTTGTGCCT ATCCGCGCAA ATGAAAAGAT TGAGTGGGAA 
GTGAAGTAA
 
Protein sequence
MTTLTITRPD DWHVHLRDGE VLKDTVRDIS RYNGRALIMP NTVPPVTNTE MALAYRDRIL 
AEQHGEQFEP LMALYLTDNT TPDEIRKAKA TGKIVAAKLY PAGATTNSDS GVTDAKNIYH 
VFEAMEEVGM LLLVHGEVTH NHVDIFDREK EFLDTVLAPI VNDFPNLKIV LEHITTSDAA 
NFVNNASDNV AATITAHHLL FNRNHMLVGG IKPHFYCLPI LKRNTHQQAL IEAATSGSKK 
FFLGTDSAPH AKGAKESACG CAGSYTAHAA LELYAEVFEN EGKLENLEAF ASLNGPDFYG 
IARNTDTVTL EKASWDVPET MPFGSDIVVP IRANEKIEWE VK