Gene VIBHAR_05213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05213 
Symbol 
ID5557299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp468403 
End bp469521 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content46% 
IMG OID640909690 
Productmaltose/maltodextrin transporter ATP-binding protein 
Protein accessionYP_001447346 
Protein GI156976440 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGTG TCACGTTAAA AAATGTTTGT AAAGCGTATG GCGACGTACT GATTTCTAAG 
AACGTAGATC TGGAGATCAA CGAAGGTGAA TTCGTTGTTT TCGTAGGTCC ATCAGGTTGT 
GGTAAATCTA CCCTGCTACG TTGTATTGCC GGTCTTGAAG ACATTACTTC AGGTGATTTG 
TATATTGGTG ACCAGCGCAT GAATGACGTA GAACCATCCA AACGTGGTGT TGGTATGGTG 
TTCCAGTCTT ACGCTCTTTA CCCACACCTA AACCTATATG ACAACATGTC ATTTGGTCTG 
AAACTAGCAA AAGCTGACAA AGCGGAAATC GATAAGCGTG TTGAACACGC AGCAGAAATT 
CTCCAGTTGG GCCACCTACT AGAGCGTCAA CCAAAAGCCC TTTCTGGTGG TCAACGCCAA 
CGTGTTGCTA TCGGTCGTAC GCTAGTATCA CAACCAGATG TATTCCTTCT TGATGAACCA 
CTATCAAACT TGGATGCAGC ACTGCGTGTA AACATGCGTG CTCAAATCAC GAAACTACAA 
CGCCAACTTG GCTGTACCAT GATCTATGTA ACGCACGATC AGGTAGAAGC AATGACAATG 
GCAGACAAGA TTGTGGTTCT AGATGGCGGT TACGTATCAC AAGTTGGTAA ACCACTTGAG 
CTTTACCACT ACCCACAAAA CCGCTTTGTT GCTGGCTTTA TTGGCTCACC AAAAATGAAC 
TTCATGAGTG TTTTCATTGA TGAAGTGGAA GCAGAACGCG TAAAAGTACA GCTTTCTAAC 
GGCGTATCTT TCTGGATCCC AGTTGATGGT ACAACAGTGA ATCGCGGAGA CCGCATGTCT 
CTGGGTATTC GCCCTGAGCA CTTAGTTCAA GCCGTTGACG CCGATGCGAC AATTCACGGT 
GAAGTGATGA TCGTAGAGAA ACTAGGTAAC GAAACTCAGG TTTACCTAAA CCTTGAGGGT 
GCAGACGCAG ACGTTATCTA CCGTCAACCA GATACACTAC CAGTAGTGTC TGGTGACAAA 
CTGGAAATCG GTATCCCTGC ATATCGTTGT CATCTATTCC ACAGCGATGG CCGTGCATGC 
CGCCGACTAC ACAAAGAAAA CGGCGTAGAT TTCGAGTAA
 
Protein sequence
MVSVTLKNVC KAYGDVLISK NVDLEINEGE FVVFVGPSGC GKSTLLRCIA GLEDITSGDL 
YIGDQRMNDV EPSKRGVGMV FQSYALYPHL NLYDNMSFGL KLAKADKAEI DKRVEHAAEI 
LQLGHLLERQ PKALSGGQRQ RVAIGRTLVS QPDVFLLDEP LSNLDAALRV NMRAQITKLQ 
RQLGCTMIYV THDQVEAMTM ADKIVVLDGG YVSQVGKPLE LYHYPQNRFV AGFIGSPKMN 
FMSVFIDEVE AERVKVQLSN GVSFWIPVDG TTVNRGDRMS LGIRPEHLVQ AVDADATIHG 
EVMIVEKLGN ETQVYLNLEG ADADVIYRQP DTLPVVSGDK LEIGIPAYRC HLFHSDGRAC 
RRLHKENGVD FE