| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05204 |
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| Symbol | |
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| ID | 5557409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 459160 |
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| End bp | 461355 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640909681 |
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| Product | exopolysaccharide biosynthesis protein |
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| Protein accession | YP_001447337 |
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| Protein GI | 156976431 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCA ATTCAATGAA CGAAACTCAT TCTACTCAAG CCCCTACGAA TCAAGTCCCC
CTGATTCGTT TTGGGCATCA TTTTAGAACC CTTAAGAAGA ACTGGCTGAG TATCTTAGCA
TTCACCATCA TCTTCTCACT TACGTGTACT TGGTATATCT ACTCGAAAAA ATCAGTCTAC
CAAGCCACTG CCACCCTTCT TATCCAAGAA GAGCAAAAAA GTGCACTTTC GATTGAGGAA
GTTTACGGTG TCGACACTAC GAAAAAAGAG TACTTTCAAA CTCAAATCGC GATTCTTAAG
TCAAACCATA TCGCAGATAA AGTGATCACC AAATTGAATC TGGTTAACCA TCCAGACTTC
ACTAGCTCAA GCGGTATTAA GCAAAAAATC GATGAAATTA AAGCGATTCC TTTCGTTCAA
GATTTATTGC ATGTCGCACC GAATCCAAAA GAAACCTCAC AACACACAAA GCCGTATTAT
CAAGCACTTC AAACATTCAA GAGAAAGCTG GATATTGAAC CGGTCCGTAA TACACAGTTG
GTAAAAATTC GTTTTCGCTC TACCGATCCA CAACTGGCGA CCACCATCGC TAACGCAATA
GGCCAAGCAT ATATCGATGC CAATTTTGAA GCGAAATTGG TTGTGACACA AAATGCAGCT
ACGTGGCTCA CCAATAACTC GCAAAAACTA GAAGAGCGCT TAAGAGCATC AGAACAAGCA
CTACAAGATT TCTTAATGCA AGAAGGCTTA ATCGATATCA ATGGTATCGA TGACATCTAT
GCCAATGAGC TTGAAGAACT AAACCGTAAA CTCAACGCCG CAGTAAACAA TCGCATTGAA
GCACAAACAT TAATTCAACT GCTCAAGCGT AAATCGACAC AAGACATCGA CAGCTTGCTA
TCGATTGATG AGTTTGCAAA CCAAGCTCAA ATTCGTGATT TGAAAATGTC GGAAGCCCAA
GCCGCTAAAA GTGTCTCTGA GCTGTCTCAG CGCTACGGCC CTAAACATGA TCGTATGATT
CAAGCCAAAG CGCAATTAGC GTCTATACAA GCTCGAACTG AACAATTGAT TCGAGAAATT
TCGTTCAGTA AACAGCAAGA CTTGCTTGCA GCAAAAGCGC AAGAAGACAT GCTTCGTGCT
GAGCTGGATA ACAAAAAATC TGATTTCCAA ATGCTAGGTT CGCAAAAGGC ACGATACGAA
CAACTTAAGC GTGAAGTTGA ATCGAACAAA GATCTCTACG AAGCGTTCTT GAATCGCGAA
AAAGAAACCA ATGCCACCAG CGATTATAAG AATGTCACCG CTCGATTTAC TGATCCTGCG
ATCGTGCCTC TGTTCCCAAT CGCACCTCAG CGAATGAAAC TCGTGCTGAT AGCTACCTTC
TTTGGCTTTG CTATCGCTTG TGCCCTTTTG ATCATCCTTG AGACACTGCG CGAAGTCATT
CGTACCTCTT CTGATGTTCA AGACAAGCTC GGAGTCACCT GCTTAGGTAC GATTCCGAAA
GTGAAAAAGC GTGCTCTTTG CCAAAAAGGC GTTACTTACT CAGCTTATTT GGACCAAGAC
GAAAAGCTGT TCAGCGAAGC GTGTCGCTCC GTCCGAACCT CGTTATTGCT GAGACTAACG
AACTCTAAGC AGAAAATCTT ACCATTTACT TCTGCCATTC CTGAGGAAGG AAAGACATCA
ACCAGTATTA ATATGGCTGT CTCGTTCTCA ACCATGGAAA AGGTACTGCT GATTGACTGC
GACCTGCGAA AACCCTCATT AGCAAAACGC TTCAACCTTC CAGAATCAAG CCCAGGTTTA
ACCAACATTC TTACGATGGA TACGCCTTTG AGCGAATGCA TCATCAAAAA AGAAGAGGCG
AACTTAGATG TGTTGCCTGC CGGTATTATT CCACCAAATC CACAGGAGCT ATTGGCATCT
GACCGTTTTG AAAAACTCCT TGAGTACCTA GCGAGTAAGT ATGACCGAAT CATCATTGAC
ACCCCACCTC TGCTTTCGGT AAGTGATGCT CTTATTCTTG GTCAAAAAGC CAATGGGTTG
ATTACTGTTA TTCGCTCCGA GTCAACTAAA GCTTCACTGG TTAACGTAGC GTTATCCAAA
CAAATTCAAC ATTCAATACC ATCTCTTGGT GTGCTTATCA CTCAGGCAAA ATCTAAGGAA
GGAGAAACAC TTTATGTCCA AAAGTACGCC TACTAA
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| Protein sequence | MTGNSMNETH STQAPTNQVP LIRFGHHFRT LKKNWLSILA FTIIFSLTCT WYIYSKKSVY
QATATLLIQE EQKSALSIEE VYGVDTTKKE YFQTQIAILK SNHIADKVIT KLNLVNHPDF
TSSSGIKQKI DEIKAIPFVQ DLLHVAPNPK ETSQHTKPYY QALQTFKRKL DIEPVRNTQL
VKIRFRSTDP QLATTIANAI GQAYIDANFE AKLVVTQNAA TWLTNNSQKL EERLRASEQA
LQDFLMQEGL IDINGIDDIY ANELEELNRK LNAAVNNRIE AQTLIQLLKR KSTQDIDSLL
SIDEFANQAQ IRDLKMSEAQ AAKSVSELSQ RYGPKHDRMI QAKAQLASIQ ARTEQLIREI
SFSKQQDLLA AKAQEDMLRA ELDNKKSDFQ MLGSQKARYE QLKREVESNK DLYEAFLNRE
KETNATSDYK NVTARFTDPA IVPLFPIAPQ RMKLVLIATF FGFAIACALL IILETLREVI
RTSSDVQDKL GVTCLGTIPK VKKRALCQKG VTYSAYLDQD EKLFSEACRS VRTSLLLRLT
NSKQKILPFT SAIPEEGKTS TSINMAVSFS TMEKVLLIDC DLRKPSLAKR FNLPESSPGL
TNILTMDTPL SECIIKKEEA NLDVLPAGII PPNPQELLAS DRFEKLLEYL ASKYDRIIID
TPPLLSVSDA LILGQKANGL ITVIRSESTK ASLVNVALSK QIQHSIPSLG VLITQAKSKE
GETLYVQKYA Y
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