| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05188 |
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| Symbol | |
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| ID | 5557321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 444538 |
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| End bp | 446409 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640909665 |
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| Product | PTS system fructose-specific IIABC component |
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| Protein accession | YP_001447321 |
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| Protein GI | 156976415 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAT TAAACTTTAT TGAGCTGGAA AACATTTGCT TGGATTTGCA GGCTCAAACC
AAAGATGAAG CGCTCAAAGA GCTCGTCGAA TTGTTGGACG CGGCGGGTAA GCTCACTAGC
AAAAGTCAGT TCTTGGCGGA CATTTGGAAA CGAGAAGAGA TTGGCAATAC CGGCTTTGAC
GAGGGTATTG CCATTCCTCA CGCCAAAAGT AACGCGGTTG CCAAACCCGC AGTCGCAGTG
GGCATCAGCC GAAAAGGGAT TGATTATGGT GCCGATGACG GCGAACTGTC TGACGTATTT
TTCATGCTGG CTTCTCCGGA TGGGGACGAC CATCACCACA TTGAAGTCTT GGCACAAATT
TCTACCAAAA TCATTGAAGA TGGTTTCGTC AATAAGTTAA AAGCGGCGGA GTCGGTGGAG
GAAGCGCGCG AGCTACTTAC TGATATTCAA TCGAACACGA ATGACTCTGG TATCGATCCT
TTAGAATTTG CGTCTGAGCC ACCCAGCCCT TGGGCGCAAA AGCTCGGCAG AATGAAAGAA
CACTTGCTGT TTGGTACCTC TCATATGATT CCGTTTATTG TCGTGGGCGG CGTGTTGTTG
TCTCTGTCTG TGATGATTTC AGGCCATGGT GGCGTTCCGG AAGAGGGGAT ACTGGCAGAT
ATCGCTGAGA TGGGTATCGC TGGTTTGACG CTGTTTACCG CGGTATTGGG TGGTTATATT
GCCTATTCGA TGGCGGATAA GCCGGGTTTG GCTCCGGGTA TGATTGGCTC ATGGATTGCG
GTTAGTCACT ACAATACTGG CTTCTTGGGC GCGATTGTGG TCGGATTTTT CGCCGGCTTT
GTGGTTTGGC TGCTGAAGAA GATTCAACTG CCGGACAGCA TGAGCTCCCT TAGCTCGATC
TTTATCTACC CACTGGTTGG TACGTTTGTT ACCTGTGGCG CAGTGATGTG GGTGATTGGC
TCACCTATCG CCAGCGCAAT GACGACCATG AACGATGTGC TCACAGGTAT GGCGGGCTCA
GGCAAAGTGA TGTTGGGCAC CGTACTAGGC GCAATGACTG CGTTTGACAT GGGCGGCCCT
ATCAACAAAG TGGCGACTTT GTTTGCTCAA ACACAGGTAA ATACTCAGCC GTGGCTAATG
GGTGGTGTCG GTATTGCGAT CTGTACTCCG CCTTTGGGTA TGGCATTAGC GACTTTCCTA
TCGCCAAGTA AGTTTAAACG TGATGAGCGT GAGGCGGGTA AAGCGGCGGG CATCATGGGC
ATGATAGGCA TCAGTGAAGG GGCGATTCCG TTTGCTGCCG CTGACCCAGC TCGCGTACTG
CCTGCGATTG TTGCTGGTGG CATAGTTGGT AACGTGATTG GTTTTATGTT CCATGTCATT
AACCATGCGC CGTGGGGCGG CTGGATTGTA CTGCCTGTTG TGGATGGCAA GATTGGCTAC
ATTGTCGGCA CAATCGCAGG CTCGTTTACC ACAGCATTGA TTGTTATTGC GCTTAAGAAG
ACCGTCACAG AAGACGACAG TCCGGTTGGG CAATCTCAAG CTTATACGTC TGTGCAAGGC
GAGGGCGAAG CAGACATTCT TGCCGTGACG TCTTGCCCAT CTGGTGTCGC GCACACCTTC
TTAGCGGCGA AGTCATTAGA GAAAGCTGCC TGTGCGTTAG GCATTAAGAT CAAGGTCGAA
ACGCAAGGAG CGAACGGCAT CATTAACCGA ATCACTGACA AAGATATCGC CAAGGCTAGG
TTTGTTGTCT TTGCTCACGA TGTAGCCATC AAAGAGCCGG AGCGCTTCAG AAAAATGAAG
GTGCTGGATG TCAGCACTAA AGACGCGATG CTCAATGCTG CAGCACTGTT GCAGGCGAAA
AGAATCCCTT AA
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| Protein sequence | MDILNFIELE NICLDLQAQT KDEALKELVE LLDAAGKLTS KSQFLADIWK REEIGNTGFD
EGIAIPHAKS NAVAKPAVAV GISRKGIDYG ADDGELSDVF FMLASPDGDD HHHIEVLAQI
STKIIEDGFV NKLKAAESVE EARELLTDIQ SNTNDSGIDP LEFASEPPSP WAQKLGRMKE
HLLFGTSHMI PFIVVGGVLL SLSVMISGHG GVPEEGILAD IAEMGIAGLT LFTAVLGGYI
AYSMADKPGL APGMIGSWIA VSHYNTGFLG AIVVGFFAGF VVWLLKKIQL PDSMSSLSSI
FIYPLVGTFV TCGAVMWVIG SPIASAMTTM NDVLTGMAGS GKVMLGTVLG AMTAFDMGGP
INKVATLFAQ TQVNTQPWLM GGVGIAICTP PLGMALATFL SPSKFKRDER EAGKAAGIMG
MIGISEGAIP FAAADPARVL PAIVAGGIVG NVIGFMFHVI NHAPWGGWIV LPVVDGKIGY
IVGTIAGSFT TALIVIALKK TVTEDDSPVG QSQAYTSVQG EGEADILAVT SCPSGVAHTF
LAAKSLEKAA CALGIKIKVE TQGANGIINR ITDKDIAKAR FVVFAHDVAI KEPERFRKMK
VLDVSTKDAM LNAAALLQAK RIP
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