Gene VIBHAR_05158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05158 
Symbol 
ID5557430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp397918 
End bp398547 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640909635 
Producttranscriptional regulatory protein CpxR 
Protein accessionYP_001447291 
Protein GI156976385 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAA AACTCTTACT TGCAGAAGAC GACACAGAAT TGCGAGAGGT TCTCGTTGAA 
GCATTAACCT TGGAATCGTT TCAAGTGGTC GCATGTGATA ATGCAGAAGA TGCATTAGAC 
ATCGCCAGTG AACAACATTT CGACCTGGCG CTATTTGACG TCGTAATGAC GGGGATGACT 
GGTATCGAGG CCCTTTCTAC CTTAAGAAGG CAGCATCCCA ACATTGGCAT TATCATCACC 
ACTGCATTTG CTACAGTCGA CGTAGCGGTA GACGCCATGA AAAAAGGAGC GGATGAGTTT 
CTCACTAAGC CATTCAATCT CTCAGCTCTA TCTGTCACCT TAAGGCGAGT CCATGCTGAA 
CGGTCACCAA AGTCTCCTCT CGATGAGAGA AAGCATGACC AAATCTTTAG TGCTCTCTCC 
AACCCGATTC GCCGCTCGGT TATCAAGCAA CTAAAAATCC ATCGTAAAAT GAAGTTCATG 
GATCTGTGTC GAGTCGTCGG TATCGAAGAC CATACCAAAT TCAACTTCCA CCTAAAACAA 
CTGGTCAACA GCGGATTGGT TATTAAAGAA GATGGGCGAA TTTACTCGCT TACCGAACAA 
GGTCAACAAG TCCACTCCAG CATGCTTTAA
 
Protein sequence
MTLKLLLAED DTELREVLVE ALTLESFQVV ACDNAEDALD IASEQHFDLA LFDVVMTGMT 
GIEALSTLRR QHPNIGIIIT TAFATVDVAV DAMKKGADEF LTKPFNLSAL SVTLRRVHAE 
RSPKSPLDER KHDQIFSALS NPIRRSVIKQ LKIHRKMKFM DLCRVVGIED HTKFNFHLKQ 
LVNSGLVIKE DGRIYSLTEQ GQQVHSSML