Gene VIBHAR_05146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05146 
Symbol 
ID5557432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp387262 
End bp388188 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID640909623 
Producthypothetical protein 
Protein accessionYP_001447279 
Protein GI156976373 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAT CATATGCATT GCCACCTCAT GCGAATGGGG TGACATTAAC CCTTGAAGAG 
CTGCTTCAAT ATCGCACTCA ATCGGTTCGT TGGCTGCCAC CAGCACAGAG TATTTGGTCG 
CAAATGAGCG GTAACCATAC CAGCCGTCAA AAAGGTCGTG GTGTGGACTT CATGGAAGTA 
CGCCAATACC AAGCGGGTGA TGACATTCGC AGCATCGATT GGCGCGTAAC GGCTCGAACG 
GGAAAAGCGC ACACCAAGTT GTTTGCTGAA GACAAAGAGC AAGCGGTGAT CTTGTACATC 
GACTTGAGCC CAAGCATGCA CTTTGGATCG CAATATGTAT TGAAGTCAGT TCAAATGGCA 
CACTTCGCTA GCGTCTTGAT TTGGCTGACG TTAGCCAAGA AAGACCGCAT CGGTGCGGTT 
ATAGATGATG GTTCCCAGTG TATTGAGTTC CGCCCTTCTT CGCTTCAAAA GCAAGGGCTG 
AGAATTCTTG ACGCGATAGT GAATACTCAC AATCAATTGC TTACGAATCA ACAAGCTGAC 
AGCACACGCA CGTTGCCATA CATGAGCGCA ATTGAAACGC TACACAACCT GACGCCGAAA 
GGCAGTGAGC TTATTCTGCT GAGTGATTTT GCTCAAGTGG AGGAGAAAGA GCTGATTCAA 
CTGCGTCGAT TAAAGCAACA CAACAGCGTT CGTGCAGTGC AGTTTTATGA TCCTTTAGAG 
CGAGGCAAAA CCGACTTCCG AGGCCAAGCG AAAGCATCCG ATGGTCATCG AAGTCAGTGG 
TTTAATTTCG GTTCAAAAGG ACAGCGCCAA GCGTTGGAAT CTCATTTCGT TAAGCATCAG 
CAAGCCATCA AACAGCAGTG TCATTCGATG GCGATTCCAT TTAACAGTCT GTCGAGCGGG 
TTACCGTTGG TTCAGCAGTT AAGCTAA
 
Protein sequence
MSASYALPPH ANGVTLTLEE LLQYRTQSVR WLPPAQSIWS QMSGNHTSRQ KGRGVDFMEV 
RQYQAGDDIR SIDWRVTART GKAHTKLFAE DKEQAVILYI DLSPSMHFGS QYVLKSVQMA 
HFASVLIWLT LAKKDRIGAV IDDGSQCIEF RPSSLQKQGL RILDAIVNTH NQLLTNQQAD 
STRTLPYMSA IETLHNLTPK GSELILLSDF AQVEEKELIQ LRRLKQHNSV RAVQFYDPLE 
RGKTDFRGQA KASDGHRSQW FNFGSKGQRQ ALESHFVKHQ QAIKQQCHSM AIPFNSLSSG 
LPLVQQLS