| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05142 |
|---|
| Symbol | |
|---|
| ID | 5557472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 382296 |
|---|
| End bp | 383942 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909619 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001447275 |
|---|
| Protein GI | 156976369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AAGGCGCCAA ACTGGTCTTT GTTCTTATGG CCAGCCTACT GACCAGCTTT
TCGGTTTTCG CACAAAGCCT ACAAGCTAGT GTAAACAAAA CTCAGGTGGC GAAGAACGAA
GTGATCAACT TAAGGATCAT GGCAGATACC GAGCTTGGCT CAGACGCGAT TGATTTCGAT
GTATTGAAAC AGGACTTCTT TTTAGGACAG CCTCGCTACG GCCGTTCTAG TAATAACATT
AACGGCCACA AAACCGTTCG CACAGAATGG AGCATCTCGA TTGCACCGAT GAAAGAAGGC
GTCATCACCA TACCGAGCTT TTCTGCAGAT GGGATGAAAA CTGAGCCAAT TAAGCTGCGT
GTGACAAAAG ACAAAGGTGA GCCGAATCTC GACGATTTGT TTAGCTTCAA CATGAGCGTG
GATAACCATA CTTTGTATCC ACAGCAGTCA GCGACACTTC GCATGCAACT GGCGATCAAA
GTAGACCCTC GTCGCCTGGA TAATCCACAA GTGGTGCCGC CAAGCATTGA TGGGATGAAA
ATTGAGCCAG CCAGCGATAT GAAGCAGGCA CAGCGTATTA TTGATGGCTT AGAAGTGACG
GTTGTGGAAC AAGCTTTCAA CATCACAGCT GAAAAGCCGG GATCTTACAC ACTGGTGGGC
CCTCGTTTGA CTGGTTCTTA CATCTACGGC GACAACCTGA CTGGTTCTAC CAAGGTCATG
CCAATCAATA CCAAAGCAGA GCAAATGCCG ATTACTGTGA AGCCTATTCC GAAGGATTTT
AAAGGTAACT GGCTACCAGC TTCCGCACTG GAAATGACAC AAAGCTGGCA AGATGAGCAA
GGTAATCCAC TATCAGCAAC TACAGTTAAC ACTGTAAAAC AGGGCACATC GATCACACGT
ACGATCCGCA TCCGAGCTCG CGGAACTCAG GCAGAATATT TACCTCGCAT TGGTATCGTC
TACCCTAGTA CTTTGCGTGT TTATCCAGAG CAACCTCAGT TTGAAACCTC CCGCGATGGA
ACGGTAACCA TGACAGTCAA ACAGGTGTTA ATTCCGACTG AAGCTGGCGA TCTTACCCTG
CCGGGTTACA GCCTAAATTG GTGGGACAGT AACCGTGACC AAGCAAGACA AGCGGATATC
ACATCGCTGA AGCTTAATGT CGAGAAAAGC GATAGTGGCT TAATCACGCT GCCAGAAAGT
GCGTTACCAG CACAACCAGC GACAACGTCT GCCCCTGTGG TTCAAGGTGG TGTGGATTCT
ATCTGGAAAA CGCTGACATT CGTATTTGGT TTGCTGTGGC TTGTCTCATC AGCGATTGCG
TTTGGGCTTT GGAAAAAACG TGGAGCGCCA AAGGCAGAAA AAGTTGAGAC GTCGACTCAC
GGCTCATCAT TGCAAGATCT AGAAAACATC ATCAAACAAG GTGACAGCGT CAAGATTGAA
AGAGCAGTTA ACGACTACTT AAACACTCAC CACCTCAGCA ATGAGTCTGA AGCAGTGAAA
GCAGTAAAAG AAGAACTGAA TGTGATGAAC CACTCTCGCT TTAGTTCAAC GCAACAGGAA
TGGAAACCTA ACTCTCTGAT CGCCAAGGTC AAACAACTGG CTAAAGAGAA AAAAAGCAAA
CCTAGCCACC AGCTAGAAAA GCTCTAG
|
|---|
| Protein sequence | MMKKGAKLVF VLMASLLTSF SVFAQSLQAS VNKTQVAKNE VINLRIMADT ELGSDAIDFD
VLKQDFFLGQ PRYGRSSNNI NGHKTVRTEW SISIAPMKEG VITIPSFSAD GMKTEPIKLR
VTKDKGEPNL DDLFSFNMSV DNHTLYPQQS ATLRMQLAIK VDPRRLDNPQ VVPPSIDGMK
IEPASDMKQA QRIIDGLEVT VVEQAFNITA EKPGSYTLVG PRLTGSYIYG DNLTGSTKVM
PINTKAEQMP ITVKPIPKDF KGNWLPASAL EMTQSWQDEQ GNPLSATTVN TVKQGTSITR
TIRIRARGTQ AEYLPRIGIV YPSTLRVYPE QPQFETSRDG TVTMTVKQVL IPTEAGDLTL
PGYSLNWWDS NRDQARQADI TSLKLNVEKS DSGLITLPES ALPAQPATTS APVVQGGVDS
IWKTLTFVFG LLWLVSSAIA FGLWKKRGAP KAEKVETSTH GSSLQDLENI IKQGDSVKIE
RAVNDYLNTH HLSNESEAVK AVKEELNVMN HSRFSSTQQE WKPNSLIAKV KQLAKEKKSK
PSHQLEKL
|
|---|
| |