| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05141 |
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| Symbol | |
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| ID | 5557471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 380147 |
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| End bp | 382213 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640909618 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447274 |
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| Protein GI | 156976368 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGAGG CCATATTCAA ACATCTAGAG CAGCACTTTT CTCCAGGTGC CATTGCTATT
TTTGATGACC CGTTAACGAA CTCATCTGGC TCGGTAAGGT TCTCACGAGG TAATCTGTTC
CCTATTAAAA AATATCCGCA AGCCTTTTGG GAATGGGCAA ACCAGTTTGA TACCTCAGAG
AGCATCATTC CCTTGGCTAT CAATACATGT AACTGGAACC ATGCCCAAGA TTTGGGGGGC
GAGAGCTACA TTATGATGCT CGACAACACG CCAGTTAAAC GTACCTACCT ACTTATCCAA
AACGTTCAAG CTCGCTCCGC CCACAACATC TATGAAGAAA GTTACGATGC AATGCAACTG
TCAGCGGCTC GCTGGCAATG TATTCGTGCA GAAAAGAACG CTTCCCTTGA AATGAAGCAC
CGTGACGTGC GTGAAGCTCA GTACGTGGAT GAGCTAGGGC AACGTGAGCG TTTTATCGAG
AACATGAAAC TGGTGCAGCA AGTCGCGCTG GATATCTCTA ATCCTTACTC CCTAAAAGAT
CTCTATTTAA AAGCGGTGGA AGCACTGCGC GAGCGATTAG GCTTTGATCG TTCAACTCTG
ATGTTGCTCG ATATGAAAAA ACGTAGCTTC AGCGGTACTT ATGGAACTAA CGAGTCGGGC
AGCACGATTG ACGAGTTCCA CACTCAGTAC GATTTACATC AATTAAGTGA AGAGTACATT
GCGACCCTTT CGAGCCCGGA ACGTAACTTG GTTATCGTCG ATGATGCACC CATTTATACC
GCGGGCAAAG TCGTCGGGCA GGGGTGGAAT GCGATGTTGA TCTTGCGCGA CGGTAATGAA
CCTTTTGGCT GGTTTGCCTT GGATAACTTT ATTCACCGTA AGCCGATTAC CGCTTACCAA
AAACAGATGT TGGAATCCTT TGGCTCTTTA TTTTCACAGA TCTTCATCCG CAAACGCCAA
GAACAAAATG TACGTATGCT TCATTCCAGT ATGGTTGAGT TATCACGCTG TACCACGGTA
AGTGATGTGT GCAAATCCGC CGTCACATTT GCGATTAAGA ATTTAGGCAT CGACCGAATG
GCAGTGTTCT TAACCGATGA AAATTGCTCT TATATGCAAG GCACTTGGGG AACCGACATC
CAAGGTAACG TGGTTGACGA ATCTTACTTT TTTGGTGAAA CCCAAGACTT CTCTTTGATT
AACTTAGCCC GATCGATGCC AAACGAAGTT GCTTTTGAGG AATCGGTTCC TATCTATCAT
GACTGTAAAA TTGCGGGCTT TGGCTGGGCG GCAATGACGG TGCTGACCTC GAACAGCAGT
GGCCCCATTG CCTTTATCGC TGTTGATAAC CTTTTGACTC GTGCTCCTCT CACTTCTCAA
CTGCGTGAAG TGATTCGAAT GTTTGCCTCC AGCTTGGCTG AAGTTCTTCA ACGTACACAA
GCGCAAGAGG CCATCCGAGA GTTGAACGAA AACTTAGAGC TCGAAGTTAA GAACCGAACC
AAGGAACTGC AAGAAGCGAA TCGACAACTG GAGATTTTAT CCAAACTCGA CCCATTAACG
CGCTTAGGTA ACCGCCGTAT GCTGGAGCAT GTGATGCAGA AGTACTGTTA CCTCGAGCAT
GATGAGCTCA TGTCTTTTGG CTTGATTCTT ATCGACATTG ATCACTTTGG CTTGTTTAAC
AATCATTACG GGCATTTAGA GGGCGATATT GCGTTGATGC GTATTGGTAA TATCCTCGAG
CACCATACTA AAGATGAAGA CGAAGTCTTT TGTCGCATTG GCGGGGAAGA GTTTGTCTTG
TTGATGATTG GATCGAGCCA AGAAGAAGTT CGATTACGTG CAGAGTGCAT TCGTCGTTGT
ATTGAGGAAG AGGGTATCAA GCATCGTCAT AATCCAGAAG GCGAATTGCT GACGGTGTCG
GTTGGCTATT CTTGCTATCA GGCGCAAGGA AAATACTTCA ATTTTGACCA CCTCTATCAG
CTTTCGGATA AAGCCCTTTA CCAAGCCAAA AATAGCGGTC GAAACTGCGT GCGCATGTTT
GAGGCAACAG ACCAAATTGT GGCCTAA
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| Protein sequence | MAEAIFKHLE QHFSPGAIAI FDDPLTNSSG SVRFSRGNLF PIKKYPQAFW EWANQFDTSE
SIIPLAINTC NWNHAQDLGG ESYIMMLDNT PVKRTYLLIQ NVQARSAHNI YEESYDAMQL
SAARWQCIRA EKNASLEMKH RDVREAQYVD ELGQRERFIE NMKLVQQVAL DISNPYSLKD
LYLKAVEALR ERLGFDRSTL MLLDMKKRSF SGTYGTNESG STIDEFHTQY DLHQLSEEYI
ATLSSPERNL VIVDDAPIYT AGKVVGQGWN AMLILRDGNE PFGWFALDNF IHRKPITAYQ
KQMLESFGSL FSQIFIRKRQ EQNVRMLHSS MVELSRCTTV SDVCKSAVTF AIKNLGIDRM
AVFLTDENCS YMQGTWGTDI QGNVVDESYF FGETQDFSLI NLARSMPNEV AFEESVPIYH
DCKIAGFGWA AMTVLTSNSS GPIAFIAVDN LLTRAPLTSQ LREVIRMFAS SLAEVLQRTQ
AQEAIRELNE NLELEVKNRT KELQEANRQL EILSKLDPLT RLGNRRMLEH VMQKYCYLEH
DELMSFGLIL IDIDHFGLFN NHYGHLEGDI ALMRIGNILE HHTKDEDEVF CRIGGEEFVL
LMIGSSQEEV RLRAECIRRC IEEEGIKHRH NPEGELLTVS VGYSCYQAQG KYFNFDHLYQ
LSDKALYQAK NSGRNCVRMF EATDQIVA
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