Gene VIBHAR_05120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05120 
Symbol 
ID5557533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp357474 
End bp358424 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID640909597 
Producthypothetical protein 
Protein accessionYP_001447253 
Protein GI156976347 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCTT CAATCAAAGT CGGTATCAGC TCTTGTGTAC TTGGAGAACG AGTACGTTTC 
GATTCGGGAC ATAAAATCAG CAACTTCGTA ACGAAGGAAT TAGACGGCTA CTTCAGCTTT
GTGCCAGTTT GCCCTGAAGT TGGTGTAGGC ATGTCTGTGC CGCGTCCGAC TATCCGCCTA
GTCAGCAATG AAGAACGTAT TGCATTGGTC GAGACAAAAA ATCCTGACAA CGACCACACA
GAAAACATGC TCGCTTATTC CGAAAATAAA GTGAACGAAC TACAAGGTGA GCAACTGTGC
GGTTACATCG TTTGCGCTAA GTCGCCGACT TGCGGTATGG AACGTGTAAA GGTGTACAGC
AAAAACAATG CGGCAAAAGA AGGTGTTGGT TTGTACACCA AAACGTTAAT GGAAAAAATG
CCGTGGTTAC CAGTAGAAGA AGACGGTCGC CTGAACGATC CGGTATTAAA AGAGAACTTC
ATTACGCGTA TTTATTGTTT GAATGACTTT TATGAGTCAA TGGGTGGAGA GCCAACCCGC
GGTAAGATTG TCGAGTTTCA CTCGCGCTAC AAGCTGACGC TGATGGCGCA CCACCCAGAA
TCGTACCGTT CTCTTGGTCG ATTGGTGGCT GATGTAGCGA ACTATGAAAT CGATGAGTTT
TACAGCCAAT ACCGTCTGGG CTTGATGCAA GCACTACAAA ACCGTGCCAG CCGCAAAAAT
AACACCAATG TGTTGATGCA CTTACAAGGC TACTTTAAAC GCTCATTAAC TTCTGACGAG
AAAGCAGAAC TTGCGACCGT GATCAGTGAC TACCGCACAG GGTTATTACC ACTGCTTGCG
CCGCTAACGT TAATTAAGCA CTATCTCAAC GCGTACCCAG ATGCGTACTT ACAAAAACAG
AAATATCTAG AACCATACCC ACAGGAGATG AGACTTCGTT ATGGATTGTA G
 
Protein sequence
MESSIKVGIS SCVLGERVRF DSGHKISNFV TKELDGYFSF VPVCPEVGVG MSVPRPTIRL 
VSNEERIALV ETKNPDNDHT ENMLAYSENK VNELQGEQLC GYIVCAKSPT CGMERVKVYS
KNNAAKEGVG LYTKTLMEKM PWLPVEEDGR LNDPVLKENF ITRIYCLNDF YESMGGEPTR
GKIVEFHSRY KLTLMAHHPE SYRSLGRLVA DVANYEIDEF YSQYRLGLMQ ALQNRASRKN
NTNVLMHLQG YFKRSLTSDE KAELATVISD YRTGLLPLLA PLTLIKHYLN AYPDAYLQKQ
KYLEPYPQEM RLRYGL