Gene VIBHAR_05111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05111 
Symbol 
ID5557979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp347633 
End bp348763 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content48% 
IMG OID640909588 
Producthypothetical protein 
Protein accessionYP_001447244 
Protein GI156976338 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAC TACTGGTTCT GACTTACGCC GCGCTATGTA TCGCGATTTT CAAAATCTTT 
AAGATCCCAC TGAACAAGTG GACAGTGCCA ACAGCCGTAC TCGGTGGTGT AGTGTTGGTC 
GGTACACTTA TCTTACTAAT GAACTACAAC CACCCGTTTA CTCAAATTGG TAACCAAGTG 
TTCTCAACCA CCCCTGTTGT TTCAGGCGTT CGCGGTCGAG TCATTGAAGT TCCGGTTCAA 
CCAAACCAAC CGCTGCAAAA AGGTGATGTA CTTTTCCGTA TAGACCCAAT TCCATACCAA 
GCGGAAGTAG ACAAGCTAAG AGCAAAAGTA AAAGAAGCAA GCCAGGGCGC ACTTGGTCTT 
GAGTCTAGCG TTCAAGAAGC AGAATCAGCG GTCATCAAAG CGCTTGCAGA ACGTGATAAA 
GCGCAGCGCG AATTTGATCG GTACCAACGT GGCTTCGATC GTGGCGCTTT CACCGAGCAA 
CAATTAGATA CTCGTCGCCA AGCGTTCAAG GCCGCACAAG CAGCACTAGA AGTGGCGCAA 
TCAAAGCAGA AACAAGCGCA AATCGCACTC GATTCTGAAG TCGGCGGAGA AAACACGCAA 
GTCGCCTCAC TATTGGCCGA GTTAAGAAAA GCTGAGTTCA ACTTAGAGCA AACCGTCGTA 
ACCGCACCAA CGGATGGCTA TGTCACGCAA TTGGCATTGC GTCCAGGTGT GATGGCTGTA 
CCTTTGCCGC TCGCACCAGT AATGACCTTT GTCCATACCG AAGACAAGCT TTATACGGCA 
GCGTTTCGCC AGAACTCATT GCAACGTCTA GAGGCTGGGT TTGAAGCGGA GTTTATGTTC 
CGTGCATTAC CGGGCAAGGT GTTTAAAGGT CAAGTGGTCG ATGTGTTGCC AGCCATTGGT 
GAGAGCCAAT TCCAAGCTCG AGGCTCACTG CTTGGAACAG AAGCACTGCG CACCAGCGGT 
CGCGTTTTAG TGACATTAAA AATCACGGAT GACTTAGAAG ATTATCATCT GCCGATGGGT 
ACAGCGGTTG AAGTTGCCGT TTACTCCGAT AGCTTTACCC ACGTATCTAT CATGCGCAAA 
GTCCTTATTC GTATGAAGAG CTGGCAAAAC TACCTATACC TAGACCATTA A
 
Protein sequence
MDLLLVLTYA ALCIAIFKIF KIPLNKWTVP TAVLGGVVLV GTLILLMNYN HPFTQIGNQV 
FSTTPVVSGV RGRVIEVPVQ PNQPLQKGDV LFRIDPIPYQ AEVDKLRAKV KEASQGALGL 
ESSVQEAESA VIKALAERDK AQREFDRYQR GFDRGAFTEQ QLDTRRQAFK AAQAALEVAQ 
SKQKQAQIAL DSEVGGENTQ VASLLAELRK AEFNLEQTVV TAPTDGYVTQ LALRPGVMAV 
PLPLAPVMTF VHTEDKLYTA AFRQNSLQRL EAGFEAEFMF RALPGKVFKG QVVDVLPAIG 
ESQFQARGSL LGTEALRTSG RVLVTLKITD DLEDYHLPMG TAVEVAVYSD SFTHVSIMRK 
VLIRMKSWQN YLYLDH