Gene VIBHAR_05109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05109 
Symbol 
ID5557852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp346774 
End bp347322 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID640909586 
Producthypothetical protein 
Protein accessionYP_001447242 
Protein GI156976336 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTT CTGCTAAAAC CGTGGTGGTT ATTGCAATCG GTGCTGCACT ATACGGCATC 
GGCGGTTTGC CAATGTTTGG CATCCCTGTG TTTGCAAACA CGACGCTGAA ACCAGCAATG 
GCGGTATTGG CATTGTTCTC AGTATTATTC GGCCCTCTGG TAGGCTTCTT GGTTGGCTTT 
ATCGGCCACT GGGTTACCGA CCTATTTGCA GGCTGGGGCG TATGGCTCAC TTGGGTACTT 
GGTTCAGGTA TTGTTGGTTT AATTATTGGT CTTTTCCCTT CTCTGACTCG CAACCGTTTA 
GAGAAAGGTG ACTTCAATAT GAAAGACTTC GCGTTGTTCG TGGTGCTTGC GCTGTTGGGC 
AACGTATTCG GTTATGGCTG TTCAGCCTTC CTAGACACCA TTTTGTACGC AGAACCGTTC 
ACTAAGGTAT TCACACAGTT GTCGATCATC GCTCTGGGTA ACACTATTCT TATTGCTATT 
GTGGGCTTCT TCATTCTTAA GTCTGTCGCA AAACGTAACA AGCAAAGCCG CAACTTAACA 
GAGGCTTAA
 
Protein sequence
MNLSAKTVVV IAIGAALYGI GGLPMFGIPV FANTTLKPAM AVLALFSVLF GPLVGFLVGF 
IGHWVTDLFA GWGVWLTWVL GSGIVGLIIG LFPSLTRNRL EKGDFNMKDF ALFVVLALLG 
NVFGYGCSAF LDTILYAEPF TKVFTQLSII ALGNTILIAI VGFFILKSVA KRNKQSRNLT 
EA