Gene VIBHAR_05100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05100 
Symbol 
ID5558644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp338596 
End bp339342 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID640909577 
Producthypothetical protein 
Protein accessionYP_001447233 
Protein GI156976327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA TGATCGCGAG CGCCGGAGAT AAGAGAACAT CTCCACAAAG CAGAAACGCT 
CCAGAACGTC AGGCAAGTAC ACTCAACAGC ACCGATGCAA TGGCAATGGT AGAACACGGC 
AGTGAAGTGA CTCTCAACGT CACCACGCCC GTTGGTACCA AGTTCATCAC CACCAGTACA 
TTTATGGGCT GTCATTCTAA CAATACCGCG CTGATTGAAA TCCCAAATAT CTCCGATGAG 
GATTTGAAGT TCTACTTTCA AGAAGGCTTT TGGATCAACG TAAAAGCTTA CTCCCATCGT 
GGCGAAGGTG CCGTCATTCC TTTCCGAGCA CAGCTCAAAC ACCGTTTAGG CGACCCCTAC 
CCACTATTGG TGCTAAACCT TCCTAATACC ATGCAGGTAT ATCAGCTGAG AAAAGAAGTG 
CGATACGAAG TGAATCTGCG CTCTCGCCTT CAGTTTGAAC AATACCGAGC AGAATGTGAG 
ATACGTGATC TCTCTAAAAG CGGTTGTCGA TTCGTGACGT CACCGATGAG CAGAACATTG 
CAAGTTGGCG ATCTGGTGAC ACTCGACATT ACCATGCCAG GGAATGGTCG TATGCTTGCG 
CCATTGAAGG GAAGAATTTG TAACTTGCAG AAATCGGTTC ATTACGCCCG TTACGGCGTG 
GAGTTTGATG ATTTCGGCAA AGCCAACGCT AAGAACCTGT TAAGCCACCT CAAATTTGAT 
GGTACCAAGC TAAAGCTGAA AAGTTAA
 
Protein sequence
MRNMIASAGD KRTSPQSRNA PERQASTLNS TDAMAMVEHG SEVTLNVTTP VGTKFITTST 
FMGCHSNNTA LIEIPNISDE DLKFYFQEGF WINVKAYSHR GEGAVIPFRA QLKHRLGDPY 
PLLVLNLPNT MQVYQLRKEV RYEVNLRSRL QFEQYRAECE IRDLSKSGCR FVTSPMSRTL 
QVGDLVTLDI TMPGNGRMLA PLKGRICNLQ KSVHYARYGV EFDDFGKANA KNLLSHLKFD 
GTKLKLKS