Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05093 |
Symbol | |
ID | 5558674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 328196 |
End bp | 330235 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640909570 |
Product | protease |
Protein accession | YP_001447226 |
Protein GI | 156976320 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTACC CAAAAACTCG TAAAGATTCT GTCGTCGACA CTTATTTTGG TCACGACATC GCAGATCCAT ATCGCTGGTT AGAAGACGAT ATGAGCCAAG AAACCGCAGA ATGGGTTTCG GGGCAAAACT CAGTGACCTT CGATTACTTA GGTCAGATCC CTTTCCGCCA ACAAATTCGC GATTTAGTGG CGAACAGTCA GAACTATGAA AAGTATTCTC AACCTTTTGT TCATGGTGAA TACACGTACT TCTATAAAAA TGATGGTTTG CAGAACCAGA GCCTTTTATA CCGTCGCAAA GGAGAGGAGG AGGCGGAAAT CTTTCTCGAT CCGAATACTT TTTCAGAAGA AGGAACGACA TCGCTTGGCG AAGTGAAGTT CTCTAAAGAC GACACACTTG TGGCTTATTC CATTTCTGAA GGTGGTAGCG ATTGGCGTAA GATCTTCGTC ATTGATGTCG AAACTAAAGA GCAGCTTGAG CCTGAAATTG TCGACGCCAA GTTCACCACT ATTTCTTGGC TTGGTAACAA AGGTTTTTAC TACGCAAGCT ATGATAAACC ACAGGGCAGT GAGCTTTCGG CTCGTACTGA GCAGCACAAG CTTTACTACC ATGAGTTAGG TACTCCGCAA AGTGAAGACA AAGTGGTCTT TGGTGCGTTG GAGCCACAAA AGCATCGTTA TGTAGGGGGA GTGACCACCA AAGACGATCG TTTCTTGATT ATCACTGGTG CGGAATCTAC ATCAGGAAAC CGACTGTTTT ATGTGGATCT CACTTCAGAA GAGCAAGACG TTATCACGCT TCGAGATACA ACCGATGGTG ATACTTATTT GATTGATAAC CAAGATGACA CTTTAATCTT CTACACCAAC TTGGATGCGC CTAACGGCAA AGTGGTTGGC TACAACATTC AAACTCAACA ATGGACAGAG ATCATTGCTG AACAGGAGCA ACCACTGGAT ATCAGCAAAG GTGGTGGTTA CTTGTTCGCG ACTTACATGG TCGATGTTTT GTCTAAAGTT CAGCAGTTTA CTTATCAAGG CGAGTTAGTA CGTGAAGTGA CTTTACCTGA CCAAGGCACC GTATATGGCT TGCAAGGCAA AGCAGAAGAT AAGACGCTTT ACTACTCTTT TACCAACTAC GTGACGCCAC CAACCATTTT CTCTTTTGAT GTAGAAAGTG GTGAGTCAAC GCTTTATCAG GAATCGAAAG CACCGTTCGA CCGTAAAGAA TACGAATCTC AACAAGTGTT CTATACCTCG AAAGACGGTA CAAAGGTTCC GATGATCATC TCATATAAAA AAGGCACCAA ACTCGATGGC AGCGCACCAA CCATGCTTTA TGGCTATGGT GGCTTCAATA TCAGTTTGAC GCCGATGTTC TCAGGAAATG TCGCGAACTG GTTAGAACTT GGTGGCATCT ACGCAGTCGC TAACATGCGT GGCGGCGGTG AATATGGTAA AGCTTGGCAC AACGCGGGTA CTCAACAACA AAAGCAAAAC GTATTTGATG ACTTCATTGC CGTGGCGGAA TACTTGATTG AACACGACTA CACCAGCTCA GAGCGCCTTG CGATTCGTGG CGGCTCAAAT GGCGGTTTAT TGGTCGGTGC GTGCATGACT CAACGACCAG AGCTGTTTAA AGTGGCTATT CCTGCGGTTG GTGTATTGGA TATGCTTCGC TACCACACCT TTACTTCTGG TGAAGGTTGG AAATACGATT TTGGTACTTC TGAGCAAACC GAGGCGATGT TCCAATATCT ACTTGGGTAT TCACCAGTGC ATAACGTGAG AGAGGGAGTC TCGTACCCTG CTACGCTTGT CACGACAGCA GACCATGATG ACCGTGTGGT ACCTGCCCAC TCATACAAGT TCATCGCGGA GTTGCAAGAC AAGCATCAGG GAGACAATCC TGTGCTGATC CGTATTGACG TGAACGCAGG TCATGGTGCG GGGATGCCGC TGAGCAAACA AATCGACCTA ACTACCGATG TTTATGCGTT TGCTCTGCAC AACATGGGTA TCGAGAAGCT CGATATTTAA
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Protein sequence | MHYPKTRKDS VVDTYFGHDI ADPYRWLEDD MSQETAEWVS GQNSVTFDYL GQIPFRQQIR DLVANSQNYE KYSQPFVHGE YTYFYKNDGL QNQSLLYRRK GEEEAEIFLD PNTFSEEGTT SLGEVKFSKD DTLVAYSISE GGSDWRKIFV IDVETKEQLE PEIVDAKFTT ISWLGNKGFY YASYDKPQGS ELSARTEQHK LYYHELGTPQ SEDKVVFGAL EPQKHRYVGG VTTKDDRFLI ITGAESTSGN RLFYVDLTSE EQDVITLRDT TDGDTYLIDN QDDTLIFYTN LDAPNGKVVG YNIQTQQWTE IIAEQEQPLD ISKGGGYLFA TYMVDVLSKV QQFTYQGELV REVTLPDQGT VYGLQGKAED KTLYYSFTNY VTPPTIFSFD VESGESTLYQ ESKAPFDRKE YESQQVFYTS KDGTKVPMII SYKKGTKLDG SAPTMLYGYG GFNISLTPMF SGNVANWLEL GGIYAVANMR GGGEYGKAWH NAGTQQQKQN VFDDFIAVAE YLIEHDYTSS ERLAIRGGSN GGLLVGACMT QRPELFKVAI PAVGVLDMLR YHTFTSGEGW KYDFGTSEQT EAMFQYLLGY SPVHNVREGV SYPATLVTTA DHDDRVVPAH SYKFIAELQD KHQGDNPVLI RIDVNAGHGA GMPLSKQIDL TTDVYAFALH NMGIEKLDI
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