Gene VIBHAR_05087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05087 
Symbol 
ID5558659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp320565 
End bp321887 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content43% 
IMG OID640909565 
Producthypothetical protein 
Protein accessionYP_001447221 
Protein GI156976315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCTC AAGAGTTGGT TTTGGCTCAT GAAACAGTAG AGGATGGTAA AAACTACGAG 
TCTGTAGTTA ATGCCATTCA ACTTGAATGG ATAGAACAAG CTTTGCTTGA TACATCTAAA
GCAAGTATTA GGAGACGACG TTTACCAGCG CAACAAGCGG TTTGGCTTGT TATTTGGATG
GGACTGCAAC GGAATAAATC AATTAAGGAA GTGTGTAGTT CTCTTGACTT AGCTCTTCAA
CCCGAACCTC AGAATACATG GTCTCGTGTT GCACCTAGTG TGCTAACTGA CTCTAGGCGA
CGTTTAGATG AGGCACCTCT TGCCGCTTTG TTTAAAACCT CTGTGGCGGC TTGGGAGAGC
GACGCACTAG TAAAAGATAA GATGCTAGGG CTAAGCATCA TGGCCGTGGA TGGTACAACT
TTTCGTTGTC AAGATTCAGA AGACAATGCG AAAGCATTTG GATTCATTTC TCAAAAACAT
AAACCTTACC CTCAACTTCG CTTAGTCGGC CTGATGGCGA CCGAGACACG CTTTATGATG
GGGGCTGCAT TCGATGCTTG TCAGGTTGGC GAGGCAACGT TAGCACACAG ATTATTAGCA
GACGTGCCAG CCAACTCGCT TACATTGTTT GATCGTTGCT ACTTTTCCGC CAACTTGTTG
ATATCGTGGA ATGCAGCAGC CTCCAATAGT CACTGGCTAA CTCCCGTAAA ACGGAAATTA
AGATATGAAG TTGTAGAGCA CTTTGCTGAA AACGACATGC TTATTTCTAT GCCTATCTCA
CCACAAGCTC AGCGTAATAA CCCTAATTTA CCGACTCATT GGCAGGCACG TCTCATCCTC
TATAAAGACC CAAAAGGTGA AATTGAAGGC TTTATAACTT CCCTTGTTGA CCCTAAGAAG
TACTCATTAG AAGATTTATT AGCTGTCTAT TGGCAACGCT GGGAAATAGA AGAAGGTTAC
GGTGAGATAA AGCAAACTCA GCTACAAAGC GAGGTTACCT TGAGAAGTCG TTTTGCTGTT
GGTGTTAGAC AAGAGCTCTG GGGAATACTG CTAGCGTACA ATTTGGTGCG CTTAGAGATG
ATTCATATTG CTCAAGACGC TGATGTAAGC CCAACTAGAG TTAGCTTTAC AGCGGCAATA
AACTTAATAG ATACCCAGTT ACGTTGGTTG GCACTTAGTC CTGATGGAAC TCTACCGAGC
AAACTCAAGC AAATGAGGGA AAGCATAAGT CACTTCATTT TACCAGATAA AAGAAAGGAC
CGAACGTATC CACGTTCAGT CCTTTTTGTC CCTACAAAAT ATCCATTTAG ATATAAGCAT
TAA
 
Protein sequence
MFAQELVLAH ETVEDGKNYE SVVNAIQLEW IEQALLDTSK ASIRRRRLPA QQAVWLVIWM 
GLQRNKSIKE VCSSLDLALQ PEPQNTWSRV APSVLTDSRR RLDEAPLAAL FKTSVAAWES
DALVKDKMLG LSIMAVDGTT FRCQDSEDNA KAFGFISQKH KPYPQLRLVG LMATETRFMM
GAAFDACQVG EATLAHRLLA DVPANSLTLF DRCYFSANLL ISWNAAASNS HWLTPVKRKL
RYEVVEHFAE NDMLISMPIS PQAQRNNPNL PTHWQARLIL YKDPKGEIEG FITSLVDPKK
YSLEDLLAVY WQRWEIEEGY GEIKQTQLQS EVTLRSRFAV GVRQELWGIL LAYNLVRLEM
IHIAQDADVS PTRVSFTAAI NLIDTQLRWL ALSPDGTLPS KLKQMRESIS HFILPDKRKD
RTYPRSVLFV PTKYPFRYKH