Gene VIBHAR_05083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05083 
Symbol 
ID5557862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp317380 
End bp318411 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content43% 
IMG OID640909561 
Producthypothetical protein 
Protein accessionYP_001447217 
Protein GI156976311 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA TATTGACTCC CCAACAGAAA CTACAACTCG AAGAGATGCA CGATTCCACT 
CGTGATGGTC GAGTGCGTGA CCGCATCAAA GCGGTTTTAC TTGCGTCTGA AGGTTGGAGT 
CAGACGATGA TTTCTCAAGC TCTTCGTATT CACGAATCAA CTGTTGCACG TCACCTCAGT 
GACTACGTGC TTTCTGAAAA ACTGAAGCCT GAAAATGGTG GAAGCCAAAG CAAGCTTTCT 
GTTACTCAAA CCATGCATCT AATCGAGCAT TTGACAGACA AGACCTATCC TCATACGTAT 
CAAATTGTTG CCTACGTTAA AGAGACATTT GGACTTGAAT ATACGGTCTC TGGTATGAAC 
AAGTGGCTTC ACCATAATGG CTTTAGCTAC AAACAGCCGA AAGGCGTTCC ACACAAGTTT 
GATGAAGCAA AACAGCAAGC ATTCATAGAG GCTTATGAAG CGCTAAAGGC AAGCTGTGGC 
AAGGATGAAT CGATAGTCTT TATCGACGCT GTTCACCCAA CCTTGTCAAC AAAAATATCT 
CACGGCTGGA TACGTACTGA TCAGGATAAA GTGATTGAAA CAACGGGTAA TCGTAGCCGA 
TTGAATATTA TTGGCGCACT GAACCTGTCG GATATCGGTG CCACCATCAT TCAGGATTAC 
GAAAGTATTA ATAGTGAAAA CATCGTTCGC TTTTTCTGTA AGTTAAGAGA GAGCTATCCG 
TTGGCCCACA AGCTTCATAT CATTTTAGAT GGTGCGGGAT ATCACCGTAG TGACTTGGTC 
AGAGATGCGG CATTTGTCCT TAATATTGAG CTGCATTATC TTCCACCTTA CAGCCCAAAC 
CTCAATCCAA TAGAGCGGCT TTGGAAAGTA ATGAATGAGA AGTCGAGGAA CAACGTTTAC 
TTCAAAAGTA AACGGGACTT CAAGGCGGCA ATAGACCAAT TTTTTACTGT GACTCTTCCA 
GAGATCGCAG GCTCTTTGGC ATCTCGAATT AATGATAATT TTCAGGTTCT CAAGCCTGCA 
TCTTCAAGTT GA
 
Protein sequence
MKLILTPQQK LQLEEMHDST RDGRVRDRIK AVLLASEGWS QTMISQALRI HESTVARHLS 
DYVLSEKLKP ENGGSQSKLS VTQTMHLIEH LTDKTYPHTY QIVAYVKETF GLEYTVSGMN 
KWLHHNGFSY KQPKGVPHKF DEAKQQAFIE AYEALKASCG KDESIVFIDA VHPTLSTKIS 
HGWIRTDQDK VIETTGNRSR LNIIGALNLS DIGATIIQDY ESINSENIVR FFCKLRESYP 
LAHKLHIILD GAGYHRSDLV RDAAFVLNIE LHYLPPYSPN LNPIERLWKV MNEKSRNNVY 
FKSKRDFKAA IDQFFTVTLP EIAGSLASRI NDNFQVLKPA SSS