Gene VIBHAR_05053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05053 
Symbol 
ID5558656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp294141 
End bp295157 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID640909531 
Producthypothetical protein 
Protein accessionYP_001447187 
Protein GI156976281 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGC ATAAAATCAT CGGCATCGAT TTAGCAAAAA ATATTTTCTT CCTTGTTGAA 
ATCAATCACA AAGGGAAGAA CCTCAGCCGT AAAAAACTCC AACGAAGCAG ATTACTTAAC 
TACGTCGCAA ATCAAAGTCC ATGCATAATT GCGATGGAGG CCTGTTCCGG TGCTCATTAC 
TGGGCTCGTG AATTCGAAAA ATTTGGGCAT GATGTTCTGC TATACCCTCC TCAGCATGTC 
AAAAATCAGC GCCGTAAACA AAAGAACGAC TATAACGATG CTGAAGCGAT TGCTGAACTC 
GCACTCTATC AACGGGTTTA CCCTGTCCAA CACAAATCCA TCGAGCAACA AGACATTCAA 
TCGTTGATTC GAATGCGCAG ACTATGTGTT ACCGAAAGAA CCCGTTTGAT TAACCAGGTT 
CGAGGGCTCG TTGCTGAATA CGGTATTGTT ATCCCAAAAG GGAAAGCAGC CTTTAGACAA 
GCCATTCCCG AAATATTGGA AGAGGTGGAA AACCAACTCT CTCTAATATT GCGTGAACTT 
CTATCACGTC AATATGAACG CTATTTATAT ATCGATGAAC AAATCCTATG GTTTGAAGAG 
AAACTCAGCC AAACCGTTAA ACAATTTGAT AATGCCAAAA GACTGATGTC TATTCCCGGC 
TTTGGACCAC TCACTAGCCA AGCTGTCGCC GTATGGCTCG GCTCTGGGCT GCAATTTAAA 
ACTGGGCGCG ACGCTTCTGC TGCGATGGGG CTCGTTCCAA AGCAAGACAC AACGGGGGGC 
AATGTCATTC TTCTCGGTAT TACCAAGCGG GGCAATACTT ATATTCGGTC TTTACTGGTT 
CATGGTGCGA GAGCAGCATT AAGACGAGCC AAGTTCAAGT CCGATAAGCT AAGTAAGTGG 
ATGCTAGAAC TTCAAGAACG ACGAGGTTCC AACCGTGCAG CAGTAGCGCT CGCGAATAAA 
TTAATGCGGA TCGCTTGGGC TGTTATCGCC AAAAACGAAG AGTACCAACC AGCATAA
 
Protein sequence
MTQHKIIGID LAKNIFFLVE INHKGKNLSR KKLQRSRLLN YVANQSPCII AMEACSGAHY 
WAREFEKFGH DVLLYPPQHV KNQRRKQKND YNDAEAIAEL ALYQRVYPVQ HKSIEQQDIQ 
SLIRMRRLCV TERTRLINQV RGLVAEYGIV IPKGKAAFRQ AIPEILEEVE NQLSLILREL 
LSRQYERYLY IDEQILWFEE KLSQTVKQFD NAKRLMSIPG FGPLTSQAVA VWLGSGLQFK 
TGRDASAAMG LVPKQDTTGG NVILLGITKR GNTYIRSLLV HGARAALRRA KFKSDKLSKW 
MLELQERRGS NRAAVALANK LMRIAWAVIA KNEEYQPA